tracking-taxonomy-updates SKILL.md skillA
tracking-taxonomy-updates from fmschulz/omics-skills is an agent skill: a SKILL.md folder an AI agent loads when a task calls for it.
mdr add fmschulz/omics-skills/tracking-taxonomy-updates@git:20261001.bf5afd6Pins git:20261001.bf5afd6 in mdr.lock. Pin the fingerprint instead.
- Audit grade
- A, 17 of 17 checks passed
- Kind
- SKILL.md skill
- Repository
- fmschulz/omics-skills
- Path
skills/tracking-taxonomy-updates/SKILL.md- Versions recorded
- 6
- Latest version
- git:20261001.bf5afd6, committed Oct 1, 2026
- First version recorded
- Jul 11, 2026
- Size
- 5,807 bytes
- Repository stars
- 11
- License
- MIT
Track NCBI, GTDB, ICTV, and eukaryotic taxonomy releases, and route genomes, bins, or contigs to domain classifiers. Use when comparing releases, resolving renamed taxa, or assigning taxonomy.
Collected from public GitHub. Every version is saved exactly as it was and never changes. Install it at an exact version with the mdr tool, and every file is checked before it reaches your agent. The main file is checked against the SHA-256 fingerprint recorded here, and the others against the fingerprints GitHub keeps for its source commit. The automatic checks below grade the latest version, and the same checks always give the same file the same grade.
What the file says
# Tracking Taxonomy Updates Report taxonomy changes from authoritative sources with explicit versions, dates, and provenance, and assign taxonomy to sequences through a QuickClade domain screen followed by a domain-specific classifier. `SKILL_DIR` is the directory that contains this `SKILL.md`, for example `~/.agents/skills/tracking-taxonomy-updates`. ## Instructions ### Release and name changes 1. Fix the scope: domains, timeframe, and output type. 2. Pull release notes and current releases from the sources in [reference/sources.md](reference/sources.md). The snapshots in [reference/last-verified-snapshots.md](reference/last-verified-snapshots.md) are examples; re-check the sources for any "latest" claim. 3. Extract versioned changes and their impact, using stable identifiers from [reference/ranks-and-identifiers.md](reference/ranks-and-identifiers.md). 4. Deliver a versioned report from [reference/report-template.md](reference/report-template.md) with conflicts flagged. ### Taxonomy assignment …
Read the whole file at its exact version.
How to install
mdr add fmschulz/omics-skills/tracking-taxonomy-updates@sha256:3fcb2f162c84888aThe line at the top of this page pins the label git:20261001.bf5afd6, which is what most people want. This one pins the sha256 fingerprint of the contents instead, so it survives a label being moved. Either way the exact version is written to mdr.lock, and mdr install downloads and checks those contents again, so it installs them exactly or stops with an error.
[](https://markdownregistry.com/a/art_4kakc5rg5a3w4rb3)
2 badge image fetches in 30 days. What the badge shows.
Versions
The registry has recorded 6 versions of this file, between Jul 11, 2026 and Oct 1, 2026, about one every 16 days.
| version | committed | commit | size | audit | |
|---|---|---|---|---|---|
| git:20261001.bf5afd6 latest | 2026-10-01 | bf5afd6 | 5,807 B | A | view · diff |
| git:20260905.3e49039 | 2026-09-05 | 3e49039 | 5,047 B | A | view · diff |
| git:20260825.bd47e68 | 2026-08-25 | bd47e68 | 5,014 B | A | view · diff |
| git:20260807.4acaed9 | 2026-08-07 | 4acaed9 | 5,025 B | A | view · diff |
| git:20260712.3675171 | 2026-07-12 | 3675171 | 4,890 B | A | view · diff |
| git:20260711.5ae6f6f | 2026-07-11 | 5ae6f6f | 4,183 B | A | view |
Audit of the latest version
- pass: Frontmatter block present
- pass: Frontmatter declares a name
- pass: Frontmatter declares a description
- pass: Size between 200 bytes and 200 KB (5807 bytes)
- pass: No zero-width or bidi control characters
- pass: No instruction hidden inside an HTML comment
- pass: No link to an exfiltration or paste host
- pass: No credential-shaped string
- pass: No instruction to send local credentials anywhere
- pass: No text hidden with inline styles
- pass: No prompt-injection phrasing
- pass: No curl or wget piped into a shell
- pass: No recursive delete of root, home or parent
- pass: No instruction to read or print local credentials
- pass: No base64 blob over 200 characters
- pass: No link to a raw IP address
- pass: No script tag
Source
fmschulz/omics-skills · 11 stars · license MIT · pushed 2026-10-02 · branch main
API
GET https://markdownregistry.com/api/v1/artifacts/art_4kakc5rg5a3w4rb3 GET https://markdownregistry.com/api/v1/resolve?ref=fmschulz/omics-skills/tracking-taxonomy-updates GET https://markdownregistry.com/api/v1/blob/3fcb2f162c84888a669bb86a5d3cb338a49b803b058df167f5d942f30fb96ad2
Your AI assistant does the legwork. You hear about the deals worth your word. Hand yours the standing instructions at modelranch.com and it joins the network that reads files like this one.
Guides: the SKILL.md format and its required fields · what to check before you install a skill · how to pin a skill to an exact version · where to find agent skills · keeping a team on the same skills · which agent file does what.