experiment-reproducibility skillA
experiment-reproducibility is agent-read markdown (skill) from khaledsaeed18/dotclaude: Make a thesis's computational experiments reproducible by the examiner and by the student three months later: pinned environments, seeded randomness, a single config per run, a run manifest that records code version, data version, parameters, hardware, and timings, results written to versioned files that figures and tables are generated from, and a one-command rerun. Use when setting up experiments, before the first real run, or when a result cannot be regenerated..
Indexed from public GitHub and served as immutable, content-addressed versions. Install it pinned to an exact SHA-256 with the mdr CLI, and every file is verified against the hash recorded here before it reaches your agent. The deterministic audit below grades the latest version, and the same file always earns the same grade.
What the file says
A result that cannot be regenerated from a command is an anecdote. Reproducibility is cheap at the start and impossible at the end, so this is set up before the first run that will appear in the thesis. ## Layout ``` experiments/ env/ environment.yml or requirements.txt with exact pins; Dockerfile if system deps matter configs/ one YAML per experiment: exp01-baseline.yaml, exp02-ours.yaml data/ raw/ (never modified), processed/ (generated by scripts), DATA.md (source, licence, version, checksum) src/ the code; run.py takes --config and --seed runs/ one directory per run: <exp>-<seed>-<timestamp>/ with manifest.json, metrics.json, log.txt results/ aggregated tables (CSV) generated from runs/ by aggregate.py figures/ generated from results/ by figure scripts (research-figures) Makefile or justfile: `make exp01` runs all seeds; `make results` aggregates; `make figures` ``` …
Read the whole file at its exact version.
How to install
mdr add khaledsaeed18/dotclaude/experiment-reproducibility@git:20260921.c8f5dc3mdr add khaledsaeed18/dotclaude/experiment-reproducibility@sha256:19f966538c221eb9Pin to a label to follow the author's releases, or to a sha256 to freeze the exact bytes forever. Either way the resolved hash is written to mdr.lock, and mdr install reproduces it on any machine.
[](https://markdownregistry.com/a/art_dr667ol4y3co7otv)
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Versions
Audit of the latest version
- pass: Frontmatter block present
- pass: Frontmatter declares a name
- pass: Frontmatter declares a description
- pass: Size between 200 bytes and 200 KB (5188 bytes)
- pass: No zero-width or bidi control characters
- pass: No instruction hidden inside an HTML comment
- pass: No link to an exfiltration or paste host
- pass: No credential-shaped string
- pass: No instruction to send local credentials anywhere
- pass: No text hidden with inline styles
- pass: No prompt-injection phrasing
- pass: No curl or wget piped into a shell
- pass: No recursive delete of root, home or parent
- pass: No instruction to read or print local credentials
- pass: No base64 blob over 200 characters
- pass: No link to a raw IP address
- pass: No script tag
Source
khaledsaeed18/dotclaude · 5 stars · license MIT · pushed 2026-09-22 · branch main
API
GET https://markdownregistry.com/api/v1/artifacts/art_dr667ol4y3co7otv GET https://markdownregistry.com/api/v1/resolve?ref=khaledsaeed18/dotclaude/experiment-reproducibility GET https://markdownregistry.com/api/v1/blob/19f966538c221eb95b2164ba8ec7da8c0d21ba758e51ab015223be583037aff3
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