boltz SKILL.md skillA
boltz from yichen-zju/claude-for-research is an agent skill: a SKILL.md folder an AI agent loads when a task calls for it.
mdr add yichen-zju/claude-for-research/boltz@git:20260930.9b33ccfPins git:20260930.9b33ccf in mdr.lock. Pin the fingerprint instead.
- Audit grade
- A, 17 of 17 checks passed
- Kind
- SKILL.md skill
- Repository
- yichen-zju/claude-for-research
- Path
skills/boltz/SKILL.md- Versions recorded
- 1
- Latest version
- git:20260930.9b33ccf, committed Sep 30, 2026
- Size
- 1,251 bytes
- Repository stars
- 10
- License
- none declared
Run or plan Boltz biomolecular structure predictions for proteins, complexes, ligands, or nucleic-acid assemblies. Use when a task asks for Boltz setup, inputs, outputs, confidence interpretation, or reproduction.
Collected from public GitHub. Every version is saved exactly as it was and never changes. Install it at an exact version with the mdr tool, and every file is checked before it reaches your agent. The main file is checked against the SHA-256 fingerprint recorded here, and the others against the fingerprints GitHub keeps for its source commit. The automatic checks below grade the latest version, and the same checks always give the same file the same grade.
What the file says
# Boltz Use this skill when the active research run needs Boltz-style biomolecular prediction. Workflow: 1. Normalize inputs into explicit entities: protein chains, nucleic-acid chains, ligands, covalent links, templates, constraints, and seeds. 2. Verify the available execution route from managed endpoints, Modal, SSH, or local installs before claiming the model can run. 3. Run only from a recorded input manifest. Preserve exact sequences, ligand identifiers, model parameters, seed, hardware, package version, and command. 4. Save structures, confidence outputs, logs, and rendered previews as artifacts in the run output folder (`outputs/`). 5. Interpret the output as a hypothesis: separate high-confidence local folds from weak interfaces, ligand poses, flexible regions, and unsupported biological claims. Do not treat a single attractive structure as proof. Add verification checks against source literature, known structures, or orthogonal experiments when the result drives a decision.
Read the whole file at its exact version.
How to install
mdr add yichen-zju/claude-for-research/boltz@sha256:5d4cf8a8887e07c2The line at the top of this page pins the label git:20260930.9b33ccf, which is what most people want. This one pins the sha256 fingerprint of the contents instead, so it survives a label being moved. Either way the exact version is written to mdr.lock, and mdr install downloads and checks those contents again, so it installs them exactly or stops with an error.
[](https://markdownregistry.com/a/art_iifdjle755aiao5u)
4 badge image fetches in 30 days. What the badge shows.
Versions
The registry has recorded 1 version of this file, committed on Sep 30, 2026.
Audit of the latest version
- pass: Frontmatter block present
- pass: Frontmatter declares a name
- pass: Frontmatter declares a description
- pass: Size between 200 bytes and 200 KB (1251 bytes)
- pass: No zero-width or bidi control characters
- pass: No instruction hidden inside an HTML comment
- pass: No link to an exfiltration or paste host
- pass: No credential-shaped string
- pass: No instruction to send local credentials anywhere
- pass: No text hidden with inline styles
- pass: No prompt-injection phrasing
- pass: No curl or wget piped into a shell
- pass: No recursive delete of root, home or parent
- pass: No instruction to read or print local credentials
- pass: No base64 blob over 200 characters
- pass: No link to a raw IP address
- pass: No script tag
Source
yichen-zju/claude-for-research · 10 stars · license none declared · pushed 2026-10-21 · branch main
API
GET https://markdownregistry.com/api/v1/artifacts/art_iifdjle755aiao5u GET https://markdownregistry.com/api/v1/resolve?ref=yichen-zju/claude-for-research/boltz GET https://markdownregistry.com/api/v1/blob/5d4cf8a8887e07c2e801e27c838e6a8e33a41089beaf476d038ec9ff50c96f32
Your AI assistant does the legwork. You hear about the deals worth your word. Hand yours the standing instructions at modelranch.com and it joins the network that reads files like this one.
Guides: the SKILL.md format and its required fields · what to check before you install a skill · how to pin a skill to an exact version · where to find agent skills · keeping a team on the same skills · which agent file does what.
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