xuzhougeng/wisp-science · skills/analysis-workflow/SKILL.md

analysis-workflow skillA

analysis-workflow is agent-read markdown (skill) from xuzhougeng/wisp-science: Organize multi-step scientific analyses into reproducible, self-contained modules. Use for workflows such as QC→PCA→DEG→GSEA that produce scripts, inputs, figures, tables, and methods. Creates a stable module layout, records exact inputs/parameters/package and database versions in each module README, keeps large data as references instead of copies, and verifies outputs before completion..

Indexed from public GitHub and served as immutable, content-addressed versions. Install it pinned to an exact SHA-256 with the mdr CLI, and every file is verified against the hash recorded here before it reaches your agent. The deterministic audit below grades the latest version, and the same file always earns the same grade.

How to install

Latest version
mdr add xuzhougeng/wisp-science/analysis-workflow@git:20260829.fb241fe
Exact content
mdr add xuzhougeng/wisp-science/analysis-workflow@sha256:38006589555172a5

Pin to a label to follow the author's releases, or to a sha256 to freeze the exact bytes forever. Either way the resolved hash is written to mdr.lock, and mdr install reproduces it on any machine.

Badge

mdr badge

[![mdr](https://markdownregistry.com/badge/art_vlicm5553iqyyss3.svg)](https://markdownregistry.com/a/art_vlicm5553iqyyss3)

0 badge views in 30 days

Versions

versioncommittedcommitsizeaudit
git:20260829.fb241fe latest2026-08-29 fb241fe 5,841 BA view · diff
git:20260801.92066a82026-08-01 92066a8 4,958 BA view · diff
git:20260731.97cf55e2026-07-31 97cf55e 4,704 BA view

Audit of the latest version

A  17 of 17 checks passed. Deterministic, no model, same answer every run.
  • pass: Frontmatter block present
  • pass: Frontmatter declares a name
  • pass: Frontmatter declares a description
  • pass: Size between 200 bytes and 200 KB (5841 bytes)
  • pass: No zero-width or bidi control characters
  • pass: No instruction hidden inside an HTML comment
  • pass: No link to an exfiltration or paste host
  • pass: No credential-shaped string
  • pass: No instruction to send local credentials anywhere
  • pass: No text hidden with inline styles
  • pass: No prompt-injection phrasing
  • pass: No curl or wget piped into a shell
  • pass: No recursive delete of root, home or parent
  • pass: No instruction to read or print local credentials
  • pass: No base64 blob over 200 characters
  • pass: No link to a raw IP address
  • pass: No script tag

Source

GitHub

xuzhougeng/wisp-science · 1,102 stars · license AGPL-3.0 · pushed 2026-09-07 · branch main

API

GET https://markdownregistry.com/api/v1/artifacts/art_vlicm5553iqyyss3
GET https://markdownregistry.com/api/v1/resolve?ref=xuzhougeng/wisp-science/analysis-workflow
GET https://markdownregistry.com/api/v1/blob/38006589555172a5818b34cb16bf0b276ddf78520044247cfb40559bd511e873