biomedical-paper-reader SKILL.md skillA
biomedical-paper-reader from gaoyuan-0423/biomedical-paper-reader is an agent skill: a SKILL.md folder an AI agent loads when a task calls for it.
mdr add gaoyuan-0423/biomedical-paper-reader/biomedical-paper-reader@git:20261106.4c1b4afPins git:20261106.4c1b4af in mdr.lock. Pin the fingerprint instead.
- Audit grade
- A, 17 of 17 checks passed
- Kind
- SKILL.md skill
- Repository
- gaoyuan-0423/biomedical-paper-reader
- Path
SKILL.md- Versions recorded
- 12
- Latest version
- git:20261106.4c1b4af, committed Nov 6, 2026
- First version recorded
- Oct 2, 2026
- Size
- 9,782 bytes
- Repository stars
- 155
- License
- MIT
为单篇生物医学研究论文生成中文精读报告：逐图解释实验为什么这样设计、方法与结果如何支持结论、证据边界在哪里，并提炼可借鉴的研究设计；支持速读筛选与指定图／方法专题解析，英文或中英双语按需提供。输入可为 PDF、DOI、链接或正文。Deep-read, figure-by-figure analysis, quick screening, or focused figure/method analysis of one biomedical paper (PDF, DOI, link, or full text). 全文翻译、系统综述与多篇比较不是默认任务。.
Collected from public GitHub. Every version is saved exactly as it was and never changes. Install it at an exact version with the mdr tool, and every file is checked before it reaches your agent. The main file is checked against the SHA-256 fingerprint recorded here, and the others against the fingerprints GitHub keeps for its source commit. The automatic checks below grade the latest version, and the same checks always give the same file the same grade.
What the file says
# 生物医学文献阅读 围绕单篇论文回答：作者为什么这样设计，每一步证据支持到哪里，哪些设计可以借鉴。版本 v0.13.0（[更新记录](CHANGELOG.md)）。 默认交付是供读者理解论文的**阅读报告**： - 正文由研究问题、方法与目的、结果、论证衔接、贡献、科学局限和研究借鉴构成。 - 来源版本、查看事件、覆盖表、证据索引等工作记录独立保存，不进入正文，也不默认生成可读核查附件；分离规则见[证据规则](references/evidence-rules.md)。 - 用户明确要求核查、审稿或复现审计时，再按其目的展示相应记录。 - 正文保留自然的图号／面板引用，以及真正影响具体判断的来源或材料限制。 ## 选择语言与模式 - 默认中文，未指定时直接开始，不反复询问；论文语言不改变默认。 - 明确英文时从证据直接写成自然学术英文，不先写中文再逐句翻译；明确双语时两种表述共用证据记录，数字、方向、否定和判断强度必须一致。细则见[模式与语言适配](references/reading-modes.md)。 - 默认完整精读；“速读／筛选／quick read”选速读；“只解析 Figure 3／讲解这个方法”选专题解析。 - 语言只改变表达，模式改变实际读取范围；两者都不降低范围内的证据标准。 - 用户表达足够明确就开始，不强制填写参数。 ## 参考文件加载 | 时机 | 读取 | |---|---| | 开始前 | [模式与语言适配](references/reading-modes.md)、[证据规则](references/evidence-rules.md) | | 识别研究设计后 | [研究检查点](references/study-checks.md) 中相关段落 | | 写报告时 | [报告模板](references/report-template.md) | | 处理文件、PDF 或图像时 | [材料处理与执行规则](references/material-handling.md) | | 有图任务 | [逐图阅读记录](references/reading-record.md) | ## 1. 确认身份与范围 - 输入可以是 PDF、DOI、链接、原文片段或二手解读；优先用户原文，只有标识或二手解析时才尝试获取可访问正文。 - 核对标题、DOI、来源版本；能访问官方记录时检查更正、更新或撤稿提示。文件日期不能证明更正已纳入，细则见证据规则的来源覆盖。 - 补充材料默认只用本次上传、论文同目录或用户指定目录中可确认属于该论文的本地文件；不遍历无关目录，没有附件时继续可完成的正文分析，只有用户明确要求补取才联网下载。执行细则见[材料处理](references/material-handling.md)。 …
Read the whole file at its exact version.
How to install
mdr add gaoyuan-0423/biomedical-paper-reader/biomedical-paper-reader@sha256:5743942423fc588eThe line at the top of this page pins the label git:20261106.4c1b4af, which is what most people want. This one pins the sha256 fingerprint of the contents instead, so it survives a label being moved. Either way the exact version is written to mdr.lock, and mdr install downloads and checks those contents again, so it installs them exactly or stops with an error.
[](https://markdownregistry.com/a/art_wcvrwzha35iibggc)
1 badge image fetches in 30 days. What the badge shows.
Versions
The registry has recorded 12 versions of this file, between Oct 2, 2026 and Nov 6, 2026, about one every 3 days.
| version | committed | commit | size | audit | |
|---|---|---|---|---|---|
| git:20261106.4c1b4af latest | 2026-11-06 | 4c1b4af | 9,782 B | A | view · diff |
| git:20261105.3c04871 | 2026-11-05 | 3c04871 | 9,782 B | A | view · diff |
| git:20261105.d3ca6f5 | 2026-11-05 | d3ca6f5 | 9,782 B | A | view · diff |
| git:20261105.6207027 | 2026-11-05 | 6207027 | 9,782 B | A | view · diff |
| git:20261105.53a10d6 | 2026-11-05 | 53a10d6 | 9,782 B | A | view · diff |
| git:20261102.5faba11 | 2026-11-02 | 5faba11 | 9,781 B | A | view · diff |
| git:20261026.c6795da | 2026-10-26 | c6795da | 9,781 B | A | view · diff |
| git:20261017.1a69b00 | 2026-10-17 | 1a69b00 | 9,781 B | A | view · diff |
| git:20261007.1f6d629 | 2026-10-07 | 1f6d629 | 10,150 B | A | view · diff |
| git:20261006.f193fe5 | 2026-10-06 | f193fe5 | 8,699 B | A | view · diff |
| git:20261006.3e26f0a | 2026-10-06 | 3e26f0a | 7,886 B | A | view · diff |
| git:20261002.5b67c2f | 2026-10-02 | 5b67c2f | 6,917 B | A | view |
Audit of the latest version
- pass: Frontmatter block present
- pass: Frontmatter declares a name
- pass: Frontmatter declares a description
- pass: Size between 200 bytes and 200 KB (9782 bytes)
- pass: No zero-width or bidi control characters
- pass: No instruction hidden inside an HTML comment
- pass: No link to an exfiltration or paste host
- pass: No credential-shaped string
- pass: No instruction to send local credentials anywhere
- pass: No text hidden with inline styles
- pass: No prompt-injection phrasing
- pass: No curl or wget piped into a shell
- pass: No recursive delete of root, home or parent
- pass: No instruction to read or print local credentials
- pass: No base64 blob over 200 characters
- pass: No link to a raw IP address
- pass: No script tag
Source
gaoyuan-0423/biomedical-paper-reader · 155 stars · license MIT · pushed 2026-11-06 · branch main
API
GET https://markdownregistry.com/api/v1/artifacts/art_wcvrwzha35iibggc GET https://markdownregistry.com/api/v1/resolve?ref=gaoyuan-0423/biomedical-paper-reader/biomedical-paper-reader GET https://markdownregistry.com/api/v1/blob/5743942423fc588e292391f53d71d80efc1ec93a0b03f3f0c67a272f0fc9d9da
Your AI assistant does the legwork. You hear about the deals worth your word. Hand yours the standing instructions at modelranch.com and it joins the network that reads files like this one.
Guides: the SKILL.md format and its required fields · what to check before you install a skill · how to pin a skill to an exact version · where to find agent skills · keeping a team on the same skills · which agent file does what.