biologize-problem SKILL.md skillA
biologize-problem from yogsoth-ai/de-anthropocentric-research-engine is an agent skill: a SKILL.md folder an AI agent loads when a task calls for it.
mdr add yogsoth-ai/de-anthropocentric-research-engine/biologize-problem@git:20260923.cbc38aaPins git:20260923.cbc38aa in mdr.lock. Pin the fingerprint instead.
- Audit grade
- A, 17 of 17 checks passed
- Kind
- SKILL.md skill
- Repository
- yogsoth-ai/de-anthropocentric-research-engine
- Path
skills/biologize-problem/SKILL.md- Versions recorded
- 1
- Latest version
- git:20260923.cbc38aa, committed Sep 23, 2026
- Size
- 1,462 bytes
- Repository stars
- 508
- License
- Apache-2.0
Translate a target problem from implementation language into biological function/constraint language suitable for biological analogy search.
Collected from public GitHub. Every version is saved exactly as it was and never changes. Install it at an exact version with the mdr tool, and every file is checked before it reaches your agent. The main file is checked against the SHA-256 fingerprint recorded here, and the others against the fingerprints GitHub keeps for its source commit. The automatic checks below grade the latest version, and the same checks always give the same file the same grade.
What the file says
# biologize-problem ## Purpose Translate an implementation-specific problem into biological function and constraint language for mechanism-directed analogy search. ## Input contract ```yaml required: [target_problem, target_function] optional: [materials, environment, performance_constraints] constraints: [function must be implementation-independent and testable] ``` ## Procedure 1. Remove target-domain nouns and restate the desired function. 2. State environmental pressures, resources, and failure constraints. 3. Produce biological search terms at function, process, and adaptation levels. If the problem has been expressed as biological functions and constraints, consider `discover-biological-analog` as the next tactic. ## Output contract ```yaml produces: [biological_problem_statement, function_terms, constraint_terms] delta_fields: [findings, hypothesis_updates, uncertainties] ``` ## Quality gates - The biological formulation preserves the target function and names constraints without prescribing a target technology. ## Failure and counterexamples Reject keyword-only translations that retain the original implementation vocabulary. ## Provenance map …
Read the whole file at its exact version.
How to install
mdr add yogsoth-ai/de-anthropocentric-research-engine/biologize-problem@sha256:6d1b09b939182635The line at the top of this page pins the label git:20260923.cbc38aa, which is what most people want. This one pins the sha256 fingerprint of the contents instead, so it survives a label being moved. Either way the exact version is written to mdr.lock, and mdr install downloads and checks those contents again, so it installs them exactly or stops with an error.
[](https://markdownregistry.com/a/art_zkz7z6xykkcyjcth)
2 badge image fetches in 30 days. What the badge shows.
Versions
The registry has recorded 1 version of this file, committed on Sep 23, 2026.
Audit of the latest version
- pass: Frontmatter block present
- pass: Frontmatter declares a name
- pass: Frontmatter declares a description
- pass: Size between 200 bytes and 200 KB (1462 bytes)
- pass: No zero-width or bidi control characters
- pass: No instruction hidden inside an HTML comment
- pass: No link to an exfiltration or paste host
- pass: No credential-shaped string
- pass: No instruction to send local credentials anywhere
- pass: No text hidden with inline styles
- pass: No prompt-injection phrasing
- pass: No curl or wget piped into a shell
- pass: No recursive delete of root, home or parent
- pass: No instruction to read or print local credentials
- pass: No base64 blob over 200 characters
- pass: No link to a raw IP address
- pass: No script tag
Source
yogsoth-ai/de-anthropocentric-research-engine · 508 stars · license Apache-2.0 · pushed 2026-10-23 · branch main
API
GET https://markdownregistry.com/api/v1/artifacts/art_zkz7z6xykkcyjcth GET https://markdownregistry.com/api/v1/resolve?ref=yogsoth-ai/de-anthropocentric-research-engine/biologize-problem GET https://markdownregistry.com/api/v1/blob/6d1b09b9391826358f7cb5aaeb66b57e9eb6c7bd2caf8f71325302df4c2899f9
Your AI assistant does the legwork. You hear about the deals worth your word. Hand yours the standing instructions at modelranch.com and it joins the network that reads files like this one.
Guides: the SKILL.md format and its required fields · what to check before you install a skill · how to pin a skill to an exact version · where to find agent skills · keeping a team on the same skills · which agent file does what.