benchling-integration SKILL.md skillA

benchling-integration from marielynneblock/arcanum-artifex is an agent skill: a SKILL.md folder an AI agent loads when a task calls for it.

Install it, pinned
mdr add marielynneblock/arcanum-artifex/benchling-integration@git:20260710.0115f49

Pins git:20260710.0115f49 in mdr.lock. Pin the fingerprint instead.

Audit grade
A, 17 of 17 checks passed
Kind
SKILL.md skill
Repository
marielynneblock/arcanum-artifex
Path
skills/scientific/benchling-integration/SKILL.md
Versions recorded
5
Latest version
git:20260710.0115f49, committed Jul 10, 2026
First version recorded
Apr 6, 2026
Size
13,062 bytes
Repository stars
4
License
none declared

Benchling R&D platform integration. Access registry (DNA, proteins), inventory, ELN entries, workflows via API, build Benchling Apps, query Data Warehouse, for lab data management automation.

Collected from public GitHub. Every version is saved exactly as it was and never changes. Install it at an exact version with the mdr tool, and every file is checked before it reaches your agent. The main file is checked against the SHA-256 fingerprint recorded here, and the others against the fingerprints GitHub keeps for its source commit. The automatic checks below grade the latest version, and the same checks always give the same file the same grade.

What the file says

# Benchling Integration

## Overview

Benchling is a cloud platform for life sciences R&D. Access registry entities (DNA, proteins), inventory, electronic lab notebooks, and workflows programmatically via Python SDK and REST API.

## When to Use This Skill

This skill should be used when:
- Working with Benchling's Python SDK or REST API
- Managing biological sequences (DNA, RNA, proteins) and registry entities
- Automating inventory operations (samples, containers, locations, transfers)
- Creating or querying electronic lab notebook entries
- Building workflow automations or Benchling Apps
- Syncing data between Benchling and external systems
- Querying the Benchling Data Warehouse for analytics
- Setting up event-driven integrations with AWS EventBridge

## Core Capabilities

### 1. Authentication & Setup

**Python SDK Installation:**
```python
# Stable release
uv pip install benchling-sdk
# or with Poetry
poetry add benchling-sdk
```

**Authentication Methods:**

API Key Authentication (recommended for scripts):
```python
from benchling_sdk.benchling import Benchling
from benchling_sdk.auth.api_key_auth import ApiKeyAuth

benchling = Benchling(
…

Read the whole file at its exact version.

How to install

The exact contents, by fingerprint
mdr add marielynneblock/arcanum-artifex/benchling-integration@sha256:7fb210822e400c69

The line at the top of this page pins the label git:20260710.0115f49, which is what most people want. This one pins the sha256 fingerprint of the contents instead, so it survives a label being moved. Either way the exact version is written to mdr.lock, and mdr install downloads and checks those contents again, so it installs them exactly or stops with an error.

Badge

mdr badge

[![mdr](https://markdownregistry.com/badge/art_4mwnnw7v7idmbqh6.svg)](https://markdownregistry.com/a/art_4mwnnw7v7idmbqh6)

4 badge image fetches in 30 days. What the badge shows.

Versions

The registry has recorded 5 versions of this file, between Apr 6, 2026 and Jul 10, 2026, about one every 24 days.

versioncommittedcommitsizeaudit
git:20260710.0115f49 latest2026-07-10 0115f49 13,062 BA view · diff
git:20260710.d1b3aa82026-07-10 d1b3aa8 13,062 BA view · diff
git:20260710.ffb34002026-07-10 ffb3400 13,062 BA view · diff
git:20260515.b861afb2026-05-15 b861afb 13,062 BA view · diff
git:20260406.05dff342026-04-06 05dff34 13,063 BA view

Audit of the latest version

A  17 of 17 checks passed. Fixed automatic checks with no AI involved, so the same checks give the same answer every run.
  • pass: Frontmatter block present
  • pass: Frontmatter declares a name
  • pass: Frontmatter declares a description
  • pass: Size between 200 bytes and 200 KB (13062 bytes)
  • pass: No zero-width or bidi control characters
  • pass: No instruction hidden inside an HTML comment
  • pass: No link to an exfiltration or paste host
  • pass: No credential-shaped string
  • pass: No instruction to send local credentials anywhere
  • pass: No text hidden with inline styles
  • pass: No prompt-injection phrasing
  • pass: No curl or wget piped into a shell
  • pass: No recursive delete of root, home or parent
  • pass: No instruction to read or print local credentials
  • pass: No base64 blob over 200 characters
  • pass: No link to a raw IP address
  • pass: No script tag

Source

GitHub

marielynneblock/arcanum-artifex · 4 stars · license none declared · pushed 2026-09-19 · branch main

API

GET https://markdownregistry.com/api/v1/artifacts/art_4mwnnw7v7idmbqh6
GET https://markdownregistry.com/api/v1/resolve?ref=marielynneblock/arcanum-artifex/benchling-integration
GET https://markdownregistry.com/api/v1/blob/7fb210822e400c69c97f2d6dd242c248f046a451d435c17d06db0125b0cd7230

Your AI assistant does the legwork. You hear about the deals worth your word. Hand yours the standing instructions at modelranch.com and it joins the network that reads files like this one.

Guides: the SKILL.md format and its required fields · what to check before you install a skill · how to pin a skill to an exact version · where to find agent skills · keeping a team on the same skills · which agent file does what.

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