benchling-integration SKILL.md skillA
benchling-integration from jaechang-hits/sciagent-skills is an agent skill: a SKILL.md folder an AI agent loads when a task calls for it.
mdr add jaechang-hits/sciagent-skills/benchling-integration@git:20260528.7303680Pins git:20260528.7303680 in mdr.lock. Pin the fingerprint instead.
- Audit grade
- A, 17 of 17 checks passed
- Kind
- SKILL.md skill
- Repository
- jaechang-hits/sciagent-skills
- Path
skills/lab-automation/benchling-integration/SKILL.md- Versions recorded
- 3
- Latest version
- git:20260528.7303680, committed May 28, 2026
- First version recorded
- Feb 18, 2026
- Size
- 17,243 bytes
- Repository stars
- 381
- License
- a license file GitHub does not identify
Benchling R&D Python SDK: CRUD on registry entities (DNA, RNA, proteins, custom), inventory, ELN, workflow automation. Needs Benchling account and API key. Use biopython for local sequence analysis; pubchem for chemical DBs.
Collected from public GitHub. Every version is saved exactly as it was and never changes. Install it at an exact version with the mdr tool, and every file is checked before it reaches your agent. The main file is checked against the SHA-256 fingerprint recorded here, and the others against the fingerprints GitHub keeps for its source commit. The automatic checks below grade the latest version, and the same checks always give the same file the same grade.
What the file says
# Benchling Integration — R&D Platform SDK ## Overview Benchling is a cloud platform for life sciences R&D. The Python SDK provides programmatic access to registry entities (DNA, proteins), inventory, electronic lab notebooks, and workflows. All operations require a Benchling tenant URL and API key or OAuth credentials. ## When to Use - Creating, updating, or querying biological sequences (DNA, RNA, proteins) in Benchling registry - Automating inventory operations (containers, boxes, locations, sample transfers) - Creating or querying electronic lab notebook (ELN) entries programmatically - Building workflow automations (task creation, status updates, bulk operations) - Bulk importing entities from FASTA files or spreadsheets into Benchling - Exporting Benchling data to CSV or external databases for analysis - Syncing Benchling with external systems via event-driven integrations - For **local sequence analysis** (BLAST, alignment), use biopython instead - For **chemical compound databases**, use pubchem-compound-search instead ## Prerequisites ```bash pip install benchling-sdk ``` …
Read the whole file at its exact version.
How to install
mdr add jaechang-hits/sciagent-skills/benchling-integration@sha256:a5e8b8b086be2ee5The line at the top of this page pins the label git:20260528.7303680, which is what most people want. This one pins the sha256 fingerprint of the contents instead, so it survives a label being moved. Either way the exact version is written to mdr.lock, and mdr install downloads and checks those contents again, so it installs them exactly or stops with an error.
[](https://markdownregistry.com/a/art_77w27zgghxjklr7l)
2 badge image fetches in 30 days. What the badge shows.
Versions
The registry has recorded 3 versions of this file, between Feb 18, 2026 and May 28, 2026, about one every 49 days.
| version | committed | commit | size | audit | |
|---|---|---|---|---|---|
| git:20260528.7303680 latest | 2026-05-28 | 7303680 | 17,243 B | A | view · diff |
| git:20260428.81ea2d2 | 2026-04-28 | 81ea2d2 | 17,242 B | A | view · diff |
| git:20260218.8df1694 | 2026-02-18 | 8df1694 | 17,354 B | A | view |
Audit of the latest version
- pass: Frontmatter block present
- pass: Frontmatter declares a name
- pass: Frontmatter declares a description
- pass: Size between 200 bytes and 200 KB (17243 bytes)
- pass: No zero-width or bidi control characters
- pass: No instruction hidden inside an HTML comment
- pass: No link to an exfiltration or paste host
- pass: No credential-shaped string
- pass: No instruction to send local credentials anywhere
- pass: No text hidden with inline styles
- pass: No prompt-injection phrasing
- pass: No curl or wget piped into a shell
- pass: No recursive delete of root, home or parent
- pass: No instruction to read or print local credentials
- pass: No base64 blob over 200 characters
- pass: No link to a raw IP address
- pass: No script tag
Source
jaechang-hits/sciagent-skills · 381 stars · license a license file GitHub does not identify · pushed 2026-10-16 · branch main
API
GET https://markdownregistry.com/api/v1/artifacts/art_77w27zgghxjklr7l GET https://markdownregistry.com/api/v1/resolve?ref=jaechang-hits/sciagent-skills/benchling-integration GET https://markdownregistry.com/api/v1/blob/a5e8b8b086be2ee5c310aba7c9d565a988de75e0f1363a441aab970a0c5e574c
Your AI assistant does the legwork. You hear about the deals worth your word. Hand yours the standing instructions at modelranch.com and it joins the network that reads files like this one.
Guides: the SKILL.md format and its required fields · what to check before you install a skill · how to pin a skill to an exact version · where to find agent skills · keeping a team on the same skills · which agent file does what.
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