rfd4-proteina-commitment-curves SKILL.md skillA
rfd4-proteina-commitment-curves from nvidia-bionemo/bionemo-agent-toolkit is an agent skill: a SKILL.md folder an AI agent loads when a task calls for it.
mdr add nvidia-bionemo/bionemo-agent-toolkit/rfd4-proteina-commitment-curves@git:20261020.65f97c4Pins git:20261020.65f97c4 in mdr.lock. Pin the fingerprint instead.
- Audit grade
- A, 17 of 17 checks passed
- Kind
- SKILL.md skill
- Repository
- nvidia-bionemo/bionemo-agent-toolkit
- Path
open-models-skills/rfd4-proteina/rfd4-proteina-commitment-curves/SKILL.md- Versions recorded
- 1
- Latest version
- git:20261020.65f97c4, committed Oct 20, 2026
- Size
- 14,662 bytes
- Repository stars
- 503
- License
- a license file GitHub does not identify
Use for RFD4-Proteina commitment timing, partial-diffusion sweeps, parent-child correlations, and metric distributions.
Collected from public GitHub. Every version is saved exactly as it was and never changes. Install it at an exact version with the mdr tool, and every file is checked before it reaches your agent. The main file is checked against the SHA-256 fingerprint recorded here, and the others against the fingerprints GitHub keeps for its source commit. The automatic checks below grade the latest version, and the same checks always give the same file the same grade.
What the file says
# RFD4-Proteína Commitment Curves ## Purpose Take a finished design, re-noise it back to a restart step, denoise it again, and ask how much its metric still agrees with its parent's. Sweep the restart step and you get a curve that says **when the model made up its mind** — restart near the end and the child reproduces its parent (ρ → 1); restart near the start and it no longer recovers the parent's answer. The payoff is knowing how early you can screen: if a metric is at ρ = 0.97 by step 25, the last 75 steps cannot change its ranking. **The convention that is easy to get backwards: `t = 1` is clean, `t → 0` is pure noise.** `partial_trajectory_fraction_steps` is the *fraction re-run*, so restart step = `(1 - frac) * nsteps`. A small fraction means LESS noise and a SHORTER re-run. Run everything from the **repo root**. All arguments are Hydra `key=value`. ## Prerequisites The model runtime for sampling; pandas, NumPy, SciPy, Matplotlib, PyYAML, and Python Fire for the bundled analysis helpers. Use the user-selected model checkout at `RFPROTEINA_ROOT` for model commands, configs, and upstream manuals. This catalog contains the skills, not that checkout. …
Read the whole file at its exact version.
How to install
mdr add nvidia-bionemo/bionemo-agent-toolkit/rfd4-proteina-commitment-curves@sha256:ea91eb78b408c3a0The line at the top of this page pins the label git:20261020.65f97c4, which is what most people want. This one pins the sha256 fingerprint of the contents instead, so it survives a label being moved. Either way the exact version is written to mdr.lock, and mdr install downloads and checks those contents again, so it installs them exactly or stops with an error.
[](https://markdownregistry.com/a/art_4yxeqrrib4ljm4if)
3 badge image fetches in 30 days. What the badge shows.
Versions
The registry has recorded 1 version of this file, committed on Oct 20, 2026.
Audit of the latest version
- pass: Frontmatter block present
- pass: Frontmatter declares a name
- pass: Frontmatter declares a description
- pass: Size between 200 bytes and 200 KB (14662 bytes)
- pass: No zero-width or bidi control characters
- pass: No instruction hidden inside an HTML comment
- pass: No link to an exfiltration or paste host
- pass: No credential-shaped string
- pass: No instruction to send local credentials anywhere
- pass: No text hidden with inline styles
- pass: No prompt-injection phrasing
- pass: No curl or wget piped into a shell
- pass: No recursive delete of root, home or parent
- pass: No instruction to read or print local credentials
- pass: No base64 blob over 200 characters
- pass: No link to a raw IP address
- pass: No script tag
Source
nvidia-bionemo/bionemo-agent-toolkit · 503 stars · license a license file GitHub does not identify · pushed 2026-11-05 · branch main
API
GET https://markdownregistry.com/api/v1/artifacts/art_4yxeqrrib4ljm4if GET https://markdownregistry.com/api/v1/resolve?ref=nvidia-bionemo/bionemo-agent-toolkit/rfd4-proteina-commitment-curves GET https://markdownregistry.com/api/v1/blob/ea91eb78b408c3a05ea515e438a6b7ff4c89c3ea821100741154580f157e8446
Your AI assistant does the legwork. You hear about the deals worth your word. Hand yours the standing instructions at modelranch.com and it joins the network that reads files like this one.
Guides: the SKILL.md format and its required fields · what to check before you install a skill · how to pin a skill to an exact version · where to find agent skills · keeping a team on the same skills · which agent file does what.
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