alphagenome-atlas-website-links SKILL.md skillA
alphagenome-atlas-website-links from fridrichmethod/awesome-skills is an agent skill: a SKILL.md folder an AI agent loads when a task calls for it.
mdr add fridrichmethod/awesome-skills/alphagenome-atlas-website-links@git:20260913.5d8c8f0Pins git:20260913.5d8c8f0 in mdr.lock. Pin the fingerprint instead.
- Audit grade
- A, 17 of 17 checks passed
- Kind
- SKILL.md skill
- Repository
- fridrichmethod/awesome-skills
- Path
skills/alphagenome_atlas_website_links/SKILL.md- Versions recorded
- 1
- Latest version
- git:20260913.5d8c8f0, committed Sep 13, 2026
- Size
- 11,527 bytes
- Repository stars
- 15
- License
- a license file GitHub does not identify
Constructs deep-links and URLs for the AlphaGenome Atlas website. Supports generating single-variant exploration links (1-based chr:pos:ref>alt), genomic locus views (1-based closed chr:start-end), candidate summary tables, and AlphaGenome reference vs. alternate predictions. Use whenever visualizing, exploring, charting, or linking genetic variants and genomic loci on the AlphaGenome Atlas, or when asked to inspect, view, or link predictions for a genomic variant.
Collected from public GitHub. Every version is saved exactly as it was and never changes. Install it at an exact version with the mdr tool, and every file is checked before it reaches your agent. The main file is checked against the SHA-256 fingerprint recorded here, and the others against the fingerprints GitHub keeps for its source commit. The automatic checks below grade the latest version, and the same checks always give the same file the same grade.
What the file says
# AlphaGenome Atlas Deep-Linking & URL Configuration Construct and validate deep-links for the AlphaGenome Atlas web application (`https://deepmind.google.com/science/alphagenome/atlas`). Base URL: `https://deepmind.google.com/science/alphagenome/atlas` > [!IMPORTANT] **Mandatory Atlas Deep-Linking with Variant Scores**: Whenever > presenting, discussing, or scoring genetic variants, you **MUST always provide > clickable deep-links to the > [AlphaGenome Atlas](https://deepmind.google.com/science/alphagenome/atlas)**. > Use `scripts/alphagenome_atlas_links.py` to automate link and table > generation. -------------------------------------------------------------------------------- ## Prerequisites ```bash # 1. Single Variant Exploration Link: uv run scripts/alphagenome_atlas_links.py variant "chr9:128225994:G>A" \ --biosample K562 \ --modalities RNA_SEQ,DNASE,CHIP_TF # 2. Genomic Locus / Interval Link: uv run scripts/alphagenome_atlas_links.py locus "chr11:5288500-5290500" \ --biosample K562 \ --modalities RNA_SEQ,DNASE,CHIP_TF # 3. Format Candidate Variant Records Table (with embedded clickable links): …
Read the whole file at its exact version.
How to install
mdr add fridrichmethod/awesome-skills/alphagenome-atlas-website-links@sha256:f86db003f4d4c5deThe line at the top of this page pins the label git:20260913.5d8c8f0, which is what most people want. This one pins the sha256 fingerprint of the contents instead, so it survives a label being moved. Either way the exact version is written to mdr.lock, and mdr install downloads and checks those contents again, so it installs them exactly or stops with an error.
[](https://markdownregistry.com/a/art_n5b47wlpfrc7qulj)
1 badge image fetches in 30 days. What the badge shows.
Versions
The registry has recorded 1 version of this file, committed on Sep 13, 2026.
Audit of the latest version
- pass: Frontmatter block present
- pass: Frontmatter declares a name
- pass: Frontmatter declares a description
- pass: Size between 200 bytes and 200 KB (11527 bytes)
- pass: No zero-width or bidi control characters
- pass: No instruction hidden inside an HTML comment
- pass: No link to an exfiltration or paste host
- pass: No credential-shaped string
- pass: No instruction to send local credentials anywhere
- pass: No text hidden with inline styles
- pass: No prompt-injection phrasing
- pass: No curl or wget piped into a shell
- pass: No recursive delete of root, home or parent
- pass: No instruction to read or print local credentials
- pass: No base64 blob over 200 characters
- pass: No link to a raw IP address
- pass: No script tag
Source
fridrichmethod/awesome-skills · 15 stars · license a license file GitHub does not identify · pushed 2026-10-18 · branch main
API
GET https://markdownregistry.com/api/v1/artifacts/art_n5b47wlpfrc7qulj GET https://markdownregistry.com/api/v1/resolve?ref=fridrichmethod/awesome-skills/alphagenome-atlas-website-links GET https://markdownregistry.com/api/v1/blob/f86db003f4d4c5de150f093d848615b5299ea678e6b2760d3a49fcfc125b32e8
Your AI assistant does the legwork. You hear about the deals worth your word. Hand yours the standing instructions at modelranch.com and it joins the network that reads files like this one.
Guides: the SKILL.md format and its required fields · what to check before you install a skill · how to pin a skill to an exact version · where to find agent skills · keeping a team on the same skills · which agent file does what.