mri-reconstruction SKILL.md skillA
mri-reconstruction from kewang0622/mri-research-skill is an agent skill: a SKILL.md folder an AI agent loads when a task calls for it.
mdr add kewang0622/mri-research-skill/mri-reconstruction@v0.14.0Pins v0.14.0 in mdr.lock. Pin the fingerprint instead.
- Audit grade
- A, 17 of 17 checks passed
- Kind
- SKILL.md skill
- Repository
- kewang0622/mri-research-skill
- Path
skills/mri-reconstruction/SKILL.md- Versions recorded
- 15
- Latest version
- v0.14.0, committed Oct 31, 2026
- First version recorded
- Sep 20, 2026
- Size
- 6,816 bytes
- Repository stars
- 31
- License
- MIT
Read before turning MR data into images or parameter maps: raw k-space (Cartesian, radial, spiral, EPI; twix, ISMRMRD, numpy), GRAPPA/SENSE, coil combination, off-resonance correction, BART or SigPy, and T1, T2/EPG, T2*, water-fat (PDFF), ASL, DCE or QSM maps. Prevents silent errors in encoding sign, acceleration pattern, orientation, noise covariance and floor, water- fat swaps, timing origin and units. Ships tested numpy helpers and a finish check. Trained networks: deep-learning-recon…
Collected from public GitHub. Every version is saved exactly as it was and never changes. Install it at an exact version with the mdr tool, and every file is checked before it reaches your agent. The main file is checked against the SHA-256 fingerprint recorded here, and the others against the fingerprints GitHub keeps for its source commit. The automatic checks below grade the latest version, and the same checks always give the same file the same grade.
What the file says
# MRFoundry: MRI Reconstruction and Quantitative Maps Do the work with the tested helpers below instead of re-deriving their maths; open only the row you need. Hand-written versions of these steps failed silently in evaluation runs. ## Route | Task | Use (`scripts/`) | Read only if needed | |---|---|---| | Undersampled multi-coil Cartesian: R, offset and ACS from the mask, GRAPPA, CG-SENSE, prewhitening, coil combination, SNR units | `mrfoundry_rawrecon.py`: `sampling_pattern`, `grappa_from_mask`, `sense_combine`, `prewhiten` | [raw-data checklist](references/raw-data.md) | | Non-Cartesian (radial, spiral): exact forward model, NUFFT least squares; off-resonance with a field map | `mrfoundry_reconlib.py`: `offres_least_squares`, `smooth_field` | [raw-data checklist](references/raw-data.md#non-cartesian) | | Water-fat separation, PDFF, R2* (multi-echo GRE, multi-peak fat) | `fatwater_lib.py`: `fat_offsets_hz`, `fit_fat_water`, `fat_fraction` | [quantitative maps](references/quantitative-maps.md#water-fat) | | BART or SigPy pipelines; twix, ISMRMRD, `.cfl` files | `bart_recon.sh` | [BART and SigPy](references/bart-sigpy.md) | …
Read the whole file at its exact version.
How to install
mdr add kewang0622/mri-research-skill/mri-reconstruction@sha256:314cd5e9fa316764The line at the top of this page pins the label v0.14.0, which is what most people want. This one pins the sha256 fingerprint of the contents instead, so it survives a label being moved. Either way the exact version is written to mdr.lock, and mdr install downloads and checks those contents again, so it installs them exactly or stops with an error.
[](https://markdownregistry.com/a/art_qp4r5jd5uqk6gpwh)
1 badge image fetches in 30 days. What the badge shows.
Versions
The registry has recorded 15 versions of this file, between Sep 20, 2026 and Oct 31, 2026, about one every 3 days.
| version | committed | commit | size | audit | |
|---|---|---|---|---|---|
| v0.14.0 latest | 2026-10-31 | e7494be | 6,816 B | A | view · diff |
| v0.13.0 | 2026-10-31 | 4618a27 | 6,737 B | A | view · diff |
| v0.12.0 | 2026-10-31 | 6830dd9 | 6,737 B | A | view · diff |
| v0.12.0 | 2026-10-31 | f61f2ac | 6,714 B | A | view · diff |
| v0.12.0 | 2026-10-31 | 5143fae | 6,756 B | A | view · diff |
| v0.8.0 | 2026-10-10 | 6e4408e | 9,495 B | A | view · diff |
| v0.8.0 | 2026-10-09 | 305d420 | 9,343 B | A | view · diff |
| v0.8.0 | 2026-10-07 | 4cc7dff | 9,404 B | A | view · diff |
| v0.7.0 | 2026-09-29 | c70057d | 9,162 B | A | view · diff |
| v0.7.0 | 2026-09-28 | adaaf21 | 8,166 B | A | view · diff |
| v0.7.0 | 2026-09-24 | 90d0c56 | 7,751 B | A | view · diff |
| v0.7.0 | 2026-09-24 | f90c25f | 7,138 B | A | view · diff |
| v0.7.0 | 2026-09-22 | c1cd332 | 6,249 B | A | view · diff |
| v0.1.0 | 2026-09-22 | 6b2c20f | 4,046 B | A | view · diff |
| v0.1.0 | 2026-09-20 | a8f0a76 | 3,566 B | A | view |
Audit of the latest version
- pass: Frontmatter block present
- pass: Frontmatter declares a name
- pass: Frontmatter declares a description
- pass: Size between 200 bytes and 200 KB (6816 bytes)
- pass: No zero-width or bidi control characters
- pass: No instruction hidden inside an HTML comment
- pass: No link to an exfiltration or paste host
- pass: No credential-shaped string
- pass: No instruction to send local credentials anywhere
- pass: No text hidden with inline styles
- pass: No prompt-injection phrasing
- pass: No curl or wget piped into a shell
- pass: No recursive delete of root, home or parent
- pass: No instruction to read or print local credentials
- pass: No base64 blob over 200 characters
- pass: No link to a raw IP address
- pass: No script tag
Source
kewang0622/mri-research-skill · 31 stars · license MIT · pushed 2026-11-05 · branch main
API
GET https://markdownregistry.com/api/v1/artifacts/art_qp4r5jd5uqk6gpwh GET https://markdownregistry.com/api/v1/resolve?ref=kewang0622/mri-research-skill/mri-reconstruction GET https://markdownregistry.com/api/v1/blob/314cd5e9fa316764b2f086d9c9c4f76c6f67cb25820c71af6afdafc1e843f0e6
Your AI assistant does the legwork. You hear about the deals worth your word. Hand yours the standing instructions at modelranch.com and it joins the network that reads files like this one.
Guides: the SKILL.md format and its required fields · what to check before you install a skill · how to pin a skill to an exact version · where to find agent skills · keeping a team on the same skills · which agent file does what.