glycoengineering SKILL.md skillB

glycoengineering from marielynneblock/arcanum-artifex is an agent skill: a SKILL.md folder an AI agent loads when a task calls for it.

Install it, pinned
mdr add marielynneblock/arcanum-artifex/glycoengineering@git:20260710.0115f49

Pins git:20260710.0115f49 in mdr.lock. Pin the fingerprint instead.

Audit grade
B, 16 of 17 checks passed
Kind
SKILL.md skill
Repository
marielynneblock/arcanum-artifex
Path
skills/scientific/glycoengineering/SKILL.md
Versions recorded
4
Latest version
git:20260710.0115f49, committed Jul 10, 2026
First version recorded
Apr 6, 2026
Size
12,462 bytes
Repository stars
4
License
none declared

Analyse and engineer protein glycosylation. Scan sequences for N-glycosylation sequons (N-X-S/T), predict O-glycosylation hotspots, and access curated glycoengineering tools (NetOGlyc, GlycoShield, GlycoWorkbench). For glycoprotein engineering, therapeutic antibody optimisation, and vaccine design.

Collected from public GitHub. Every version is saved exactly as it was and never changes. Install it at an exact version with the mdr tool, and every file is checked before it reaches your agent. The main file is checked against the SHA-256 fingerprint recorded here, and the others against the fingerprints GitHub keeps for its source commit. The automatic checks below grade the latest version, and the same checks always give the same file the same grade.

What the file says

# Glycoengineering

## Overview

Glycosylation is the most common and complex post-translational modification (PTM) of proteins, affecting over 50% of all human proteins. Glycans regulate protein folding, stability, immune recognition, receptor interactions, and pharmacokinetics of therapeutic proteins. Glycoengineering involves rational modification of glycosylation patterns for improved therapeutic efficacy, stability, or immune evasion.

**Two major glycosylation types:**
- **N-glycosylation**: Attached to asparagine (N) in the sequon N-X-[S/T] where X ≠ Proline; occurs in the ER/Golgi
- **O-glycosylation**: Attached to serine (S) or threonine (T); no strict consensus motif; primarily GalNAc initiation

## When to Use This Skill

Use this skill when:

- **Antibody engineering**: Optimise Fc glycosylation for enhanced ADCC, CDC, or reduced immunogenicity
- **Therapeutic protein design**: Identify glycosylation sites that affect half-life, stability, or immunogenicity
- **Vaccine antigen design**: Engineer glycan shields to focus immune responses on conserved epitopes
- **Biosimilar characterisation**: Compare glycan patterns between reference and biosimilar
…

Read the whole file at its exact version.

How to install

The exact contents, by fingerprint
mdr add marielynneblock/arcanum-artifex/glycoengineering@sha256:d60b0d41c3c5b906

The line at the top of this page pins the label git:20260710.0115f49, which is what most people want. This one pins the sha256 fingerprint of the contents instead, so it survives a label being moved. Either way the exact version is written to mdr.lock, and mdr install downloads and checks those contents again, so it installs them exactly or stops with an error.

Badge

mdr badge

[![mdr](https://markdownregistry.com/badge/art_uo2okeyo2tgmc3xx.svg)](https://markdownregistry.com/a/art_uo2okeyo2tgmc3xx)

4 badge image fetches in 30 days. What the badge shows.

Versions

The registry has recorded 4 versions of this file, between Apr 6, 2026 and Jul 10, 2026, about one every 32 days.

versioncommittedcommitsizeaudit
git:20260710.0115f49 latest2026-07-10 0115f49 12,462 BB view · diff
git:20260710.ffb34002026-07-10 ffb3400 12,462 BB view · diff
git:20260515.b861afb2026-05-15 b861afb 12,462 BB view · diff
git:20260406.05dff342026-04-06 05dff34 12,462 BB view

Audit of the latest version

B  16 of 17 checks passed. Fixed automatic checks with no AI involved, so the same checks give the same answer every run.
  • fail: No base64 blob over 200 characters (matched: APELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPA)
  • pass: Frontmatter block present
  • pass: Frontmatter declares a name
  • pass: Frontmatter declares a description
  • pass: Size between 200 bytes and 200 KB (12462 bytes)
  • pass: No zero-width or bidi control characters
  • pass: No instruction hidden inside an HTML comment
  • pass: No link to an exfiltration or paste host
  • pass: No credential-shaped string
  • pass: No instruction to send local credentials anywhere
  • pass: No text hidden with inline styles
  • pass: No prompt-injection phrasing
  • pass: No curl or wget piped into a shell
  • pass: No recursive delete of root, home or parent
  • pass: No instruction to read or print local credentials
  • pass: No link to a raw IP address
  • pass: No script tag

Starting a new one? Use a template for SKILL.md on mdpantry, which passes every one of these checks and says what to change in it.

Source

GitHub

marielynneblock/arcanum-artifex · 4 stars · license none declared · pushed 2026-09-19 · branch main

API

GET https://markdownregistry.com/api/v1/artifacts/art_uo2okeyo2tgmc3xx
GET https://markdownregistry.com/api/v1/resolve?ref=marielynneblock/arcanum-artifex/glycoengineering
GET https://markdownregistry.com/api/v1/blob/d60b0d41c3c5b906f1c7aacee9fdc1a15cb776c757a6aa06a29afe5a09457aa7

Your AI assistant does the legwork. You hear about the deals worth your word. Hand yours the standing instructions at modelranch.com and it joins the network that reads files like this one.

Guides: the SKILL.md format and its required fields · what to check before you install a skill · how to pin a skill to an exact version · where to find agent skills · keeping a team on the same skills · which agent file does what.

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Every file in marielynneblock/arcanum-artifex

Other files named glycoengineering

glycoengineering SKILL.md skill
k-dense-ai/scientific-agent-skills · skills/glycoengineering/SKILL.md · Analyzes and engineers protein glycosylation by scanning canonical N-glycosylation sequons, describing S/T-rich…
v1.4 · audit A · 56,497 stars

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