aipoch/open-science · resources/skills/borzoi/SKILL.md

borzoi skillA

Name: borzoi
Author: aipoch

borzoi is agent-read markdown (skill) from aipoch/open-science: Predict genome-wide functional tracks (RNA-seq, CAGE, DNase, ChIP) from DNA sequence with Borzoi. Use this skill when: (1) Scoring the regulatory effect of a variant on expression/accessibility, (2) Generating predicted coverage tracks for a locus, (3) Prioritising non-coding variants by predicted track delta..

Indexed from public GitHub and served as immutable, content-addressed versions. Install it pinned to an exact SHA-256 with the mdr CLI, and every file is verified against the hash recorded here before it reaches your agent. The deterministic audit below grades the latest version, and the same file always earns the same grade.

How to install

Latest version

mdr add aipoch/open-science/borzoi@git:20260811.e7618cb

Exact content

mdr add aipoch/open-science/borzoi@sha256:8e0d39f2d5f8f304

Pin to a label to follow the author's releases, or to a sha256 to freeze the exact bytes forever. Either way the resolved hash is written to mdr.lock, and mdr install reproduces it on any machine.

Badge

[![mdr](https://markdownregistry.com/badge/art_wjlttaj6j6oaenh4.svg)](https://markdownregistry.com/a/art_wjlttaj6j6oaenh4)

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Versions

version	committed	commit	size	audit
git:20260811.e7618cb latest	2026-08-11	e7618cb	3,961 B	A	view · diff
git:20260714.a2a3282	2026-07-14	a2a3282	3,916 B	A	view

Audit of the latest version

A 17 of 17 checks passed. Deterministic, no model, same answer every run.

pass: Frontmatter block present
pass: Frontmatter declares a name
pass: Frontmatter declares a description
pass: Size between 200 bytes and 200 KB (3961 bytes)
pass: No zero-width or bidi control characters
pass: No instruction hidden inside an HTML comment
pass: No link to an exfiltration or paste host
pass: No credential-shaped string
pass: No instruction to send local credentials anywhere
pass: No text hidden with inline styles
pass: No prompt-injection phrasing
pass: No curl or wget piped into a shell
pass: No recursive delete of root, home or parent
pass: No instruction to read or print local credentials
pass: No base64 blob over 200 characters
pass: No link to a raw IP address
pass: No script tag

Source

GitHub

aipoch/open-science · 3,699 stars · license Apache-2.0 · pushed 2026-09-06 · branch main

API

GET https://markdownregistry.com/api/v1/artifacts/art_wjlttaj6j6oaenh4
GET https://markdownregistry.com/api/v1/resolve?ref=aipoch/open-science/borzoi
GET https://markdownregistry.com/api/v1/blob/8e0d39f2d5f8f304ac9a9e5f3e49da787c6c0c1066eb9d4d30ae3e408cb323c4