pydicom-medical-imaging SKILL.md skillA
pydicom-medical-imaging from jaechang-hits/sciagent-skills is an agent skill: a SKILL.md folder an AI agent loads when a task calls for it.
mdr add jaechang-hits/sciagent-skills/pydicom-medical-imaging@git:20260528.a140b59Pins git:20260528.a140b59 in mdr.lock. Pin the fingerprint instead.
- Audit grade
- A, 17 of 17 checks passed
- Kind
- SKILL.md skill
- Repository
- jaechang-hits/sciagent-skills
- Path
skills/medical-imaging/pydicom-medical-imaging/SKILL.md- Versions recorded
- 1
- Latest version
- git:20260528.a140b59, committed May 28, 2026
- Size
- 30,196 bytes
- Repository stars
- 381
- License
- a license file GitHub does not identify
Pure Python DICOM for medical imaging (CT, MRI, X-ray, ultrasound). Read/write DICOM, pixels as NumPy, edit tags, windowing (VOI LUT), PHI anonymization, build DICOM, series→3D volumes. Use histolab for WSI pathology; nibabel for NIfTI.
Collected from public GitHub. Every version is saved exactly as it was and never changes. Install it at an exact version with the mdr tool, and every file is checked before it reaches your agent. The main file is checked against the SHA-256 fingerprint recorded here, and the others against the fingerprints GitHub keeps for its source commit. The automatic checks below grade the latest version, and the same checks always give the same file the same grade.
What the file says
# Pydicom Medical Imaging ## Overview Pydicom is a pure Python library for reading, writing, and modifying DICOM (Digital Imaging and Communications in Medicine) files. It provides access to DICOM metadata tags and pixel data as NumPy arrays, supporting CT, MRI, X-ray, ultrasound, and other medical imaging modalities. The library handles compressed and uncompressed transfer syntaxes with optional codec plugins. ## When to Use - Reading DICOM files and extracting metadata (patient info, study parameters, imaging settings) - Extracting pixel data from DICOM images for analysis or visualization - Converting DICOM images to standard formats (PNG, JPEG, TIFF) - Anonymizing DICOM files by removing Protected Health Information (PHI) - Modifying DICOM metadata tags for relabeling or correction - Creating DICOM files from scratch (e.g., wrapping NumPy arrays as DICOM) - Processing CT/MRI series into 3D volumetric arrays for reconstruction - Extracting frames from multi-frame DICOM (cine/video) - For whole-slide pathology images (SVS, NDPI), use `histolab-wsi-processing` instead - For NIfTI neuroimaging volumes (.nii/.nii.gz), use `nibabel` instead ## Prerequisites …
Read the whole file at its exact version.
How to install
mdr add jaechang-hits/sciagent-skills/pydicom-medical-imaging@sha256:496d578185e80cc4The line at the top of this page pins the label git:20260528.a140b59, which is what most people want. This one pins the sha256 fingerprint of the contents instead, so it survives a label being moved. Either way the exact version is written to mdr.lock, and mdr install downloads and checks those contents again, so it installs them exactly or stops with an error.
[](https://markdownregistry.com/a/art_erbgnkapmm6uwmbo)
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Versions
The registry has recorded 1 version of this file, committed on May 28, 2026.
Audit of the latest version
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- pass: No zero-width or bidi control characters
- pass: No instruction hidden inside an HTML comment
- pass: No link to an exfiltration or paste host
- pass: No credential-shaped string
- pass: No instruction to send local credentials anywhere
- pass: No text hidden with inline styles
- pass: No prompt-injection phrasing
- pass: No curl or wget piped into a shell
- pass: No recursive delete of root, home or parent
- pass: No instruction to read or print local credentials
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- pass: No link to a raw IP address
- pass: No script tag
Source
jaechang-hits/sciagent-skills · 381 stars · license a license file GitHub does not identify · pushed 2026-10-16 · branch main
API
GET https://markdownregistry.com/api/v1/artifacts/art_erbgnkapmm6uwmbo GET https://markdownregistry.com/api/v1/resolve?ref=jaechang-hits/sciagent-skills/pydicom-medical-imaging GET https://markdownregistry.com/api/v1/blob/496d578185e80cc4c093fae2584267ab0ca342bb69a773851d959331aa931b35
Your AI assistant does the legwork. You hear about the deals worth your word. Hand yours the standing instructions at modelranch.com and it joins the network that reads files like this one.
Guides: the SKILL.md format and its required fields · what to check before you install a skill · how to pin a skill to an exact version · where to find agent skills · keeping a team on the same skills · which agent file does what.