scientific-visualization SKILL.md skillA

scientific-visualization from jaechang-hits/sciagent-skills is an agent skill: a SKILL.md folder an AI agent loads when a task calls for it.

Install it, pinned
mdr add jaechang-hits/sciagent-skills/scientific-visualization@git:20260428.81ea2d2

Pins git:20260428.81ea2d2 in mdr.lock. Pin the fingerprint instead.

Audit grade
A, 17 of 17 checks passed
Kind
SKILL.md skill
Repository
jaechang-hits/sciagent-skills
Path
skills/data-visualization/scientific-visualization/SKILL.md
Versions recorded
2
Latest version
git:20260428.81ea2d2, committed Apr 28, 2026
First version recorded
Feb 18, 2026
Size
14,573 bytes
Repository stars
381
License
a license file GitHub does not identify

Guide for choosing and creating scientific visualizations for publications and talks. Covers chart-type selection by data structure, color theory for accessibility/print, figure composition, journal formatting (Nature, Cell, ACS), and common pitfalls. Consult when visualizing data or preparing submission figures.

Collected from public GitHub. Every version is saved exactly as it was and never changes. Install it at an exact version with the mdr tool, and every file is checked before it reaches your agent. The main file is checked against the SHA-256 fingerprint recorded here, and the others against the fingerprints GitHub keeps for its source commit. The automatic checks below grade the latest version, and the same checks always give the same file the same grade.

What the file says

# scientific-visualization

## Overview

Effective scientific visualization communicates data clearly, honestly, and accessibly. Poor chart choices, misleading axes, or inaccessible color palettes can obscure findings or introduce bias. This guide covers the full workflow of scientific figure preparation: from selecting the right chart type for your data structure through color theory, accessibility, and journal submission formatting requirements.

## Key Concepts

### Chart Type and Data Type Alignment

Every chart type is optimized for a specific data structure. Mismatches (e.g., pie charts for continuous distributions, bar charts for time series) hide structure and distort perception.

| Data Type | Recommended Chart | Avoid |
|-----------|------------------|-------|
| Continuous distribution (1 group) | Histogram, violin plot, ridge plot | Bar chart with mean only |
| Continuous distribution (2–5 groups) | Violin + boxplot overlay, beeswarm | Grouped bar chart |
| Two continuous variables, correlation | Scatter plot, hexbin (large N) | Line chart without temporal order |
| Categorical counts / proportions | Bar chart (horizontal for long labels) | Pie chart (>4 categories) |
…

Read the whole file at its exact version.

How to install

The exact contents, by fingerprint
mdr add jaechang-hits/sciagent-skills/scientific-visualization@sha256:785c73c5926d3b90

The line at the top of this page pins the label git:20260428.81ea2d2, which is what most people want. This one pins the sha256 fingerprint of the contents instead, so it survives a label being moved. Either way the exact version is written to mdr.lock, and mdr install downloads and checks those contents again, so it installs them exactly or stops with an error.

Badge

mdr badge

[![mdr](https://markdownregistry.com/badge/art_ijbszgok42lwxymo.svg)](https://markdownregistry.com/a/art_ijbszgok42lwxymo)

4 badge image fetches in 30 days. What the badge shows.

Versions

The registry has recorded 2 versions of this file, between Feb 18, 2026 and Apr 28, 2026, about one every 69 days.

versioncommittedcommitsizeaudit
git:20260428.81ea2d2 latest2026-04-28 81ea2d2 14,573 BA view · diff
git:20260218.d7fafc92026-02-18 d7fafc9 14,692 BA view

Audit of the latest version

A  17 of 17 checks passed. Fixed automatic checks with no AI involved, so the same checks give the same answer every run.
  • pass: Frontmatter block present
  • pass: Frontmatter declares a name
  • pass: Frontmatter declares a description
  • pass: Size between 200 bytes and 200 KB (14573 bytes)
  • pass: No zero-width or bidi control characters
  • pass: No instruction hidden inside an HTML comment
  • pass: No link to an exfiltration or paste host
  • pass: No credential-shaped string
  • pass: No instruction to send local credentials anywhere
  • pass: No text hidden with inline styles
  • pass: No prompt-injection phrasing
  • pass: No curl or wget piped into a shell
  • pass: No recursive delete of root, home or parent
  • pass: No instruction to read or print local credentials
  • pass: No base64 blob over 200 characters
  • pass: No link to a raw IP address
  • pass: No script tag

Source

GitHub

jaechang-hits/sciagent-skills · 381 stars · license a license file GitHub does not identify · pushed 2026-10-16 · branch main

API

GET https://markdownregistry.com/api/v1/artifacts/art_ijbszgok42lwxymo
GET https://markdownregistry.com/api/v1/resolve?ref=jaechang-hits/sciagent-skills/scientific-visualization
GET https://markdownregistry.com/api/v1/blob/785c73c5926d3b90ff86b8b6f3fd4d473412d35f69f6da09cf647a0176599cd7

Your AI assistant does the legwork. You hear about the deals worth your word. Hand yours the standing instructions at modelranch.com and it joins the network that reads files like this one.

Guides: the SKILL.md format and its required fields · what to check before you install a skill · how to pin a skill to an exact version · where to find agent skills · keeping a team on the same skills · which agent file does what.

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Every file in jaechang-hits/sciagent-skills

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