drugbank-database-access SKILL.md skillA
drugbank-database-access from jaechang-hits/sciagent-skills is an agent skill: a SKILL.md folder an AI agent loads when a task calls for it.
mdr add jaechang-hits/sciagent-skills/drugbank-database-access@git:20260428.81ea2d2Pins git:20260428.81ea2d2 in mdr.lock. Pin the fingerprint instead.
- Audit grade
- A, 17 of 17 checks passed
- Kind
- SKILL.md skill
- Repository
- jaechang-hits/sciagent-skills
- Path
skills/structural-biology-drug-discovery/drugbank-database-access/SKILL.md- Versions recorded
- 2
- Latest version
- git:20260428.81ea2d2, committed Apr 28, 2026
- First version recorded
- Feb 18, 2026
- Size
- 23,267 bytes
- Repository stars
- 381
- License
- a license file GitHub does not identify
Parse local DrugBank XML for drug info, interactions, targets, and properties. Search by ID/name/CAS, extract DDIs with severity, map targets/enzymes/transporters, compute SMILES similarity. Primary via local XML; REST API rate-limited (3k/month dev). For live bioactivity use chembl-database-bioactivity; for compound properties use pubchem-compound-search.
Collected from public GitHub. Every version is saved exactly as it was and never changes. Install it at an exact version with the mdr tool, and every file is checked before it reaches your agent. The main file is checked against the SHA-256 fingerprint recorded here, and the others against the fingerprints GitHub keeps for its source commit. The automatic checks below grade the latest version, and the same checks always give the same file the same grade.
What the file says
# DrugBank Database — Local XML Access ## Overview Query the DrugBank comprehensive drug database (14,000+ drug entries, 5,000+ protein targets, 17,000+ drug interactions) by parsing the locally downloaded XML file with Python's ElementTree. Covers drug lookups, interaction checking, target/pathway extraction, chemical property analysis, and cross-database identifier mapping. ## When to Use - Looking up drug information (description, indication, mechanism, pharmacology) by DrugBank ID, name, or CAS number - Checking drug-drug interactions and severity classifications for polypharmacy safety - Extracting drug targets, enzymes, transporters, and carriers with UniProt accessions - Retrieving chemical properties (SMILES, InChI, molecular weight) for cheminformatics analysis - Mapping DrugBank entries to external databases (PubChem, ChEMBL, UniProt, KEGG) - Building drug similarity matrices from molecular fingerprints - For live bioactivity data (IC50, Ki, EC50) use `chembl-database-bioactivity` instead - For compound property lookups without downloading a database use `pubchem-compound-search` instead ## Prerequisites …
Read the whole file at its exact version.
How to install
mdr add jaechang-hits/sciagent-skills/drugbank-database-access@sha256:3a53537c04ca3fbeThe line at the top of this page pins the label git:20260428.81ea2d2, which is what most people want. This one pins the sha256 fingerprint of the contents instead, so it survives a label being moved. Either way the exact version is written to mdr.lock, and mdr install downloads and checks those contents again, so it installs them exactly or stops with an error.
[](https://markdownregistry.com/a/art_t6exg5lcklaw7c36)
1 badge image fetches in 30 days. What the badge shows.
Versions
The registry has recorded 2 versions of this file, between Feb 18, 2026 and Apr 28, 2026, about one every 69 days.
| version | committed | commit | size | audit | |
|---|---|---|---|---|---|
| git:20260428.81ea2d2 latest | 2026-04-28 | 81ea2d2 | 23,267 B | A | view · diff |
| git:20260218.8df1694 | 2026-02-18 | 8df1694 | 23,397 B | A | view |
Audit of the latest version
- pass: Frontmatter block present
- pass: Frontmatter declares a name
- pass: Frontmatter declares a description
- pass: Size between 200 bytes and 200 KB (23267 bytes)
- pass: No zero-width or bidi control characters
- pass: No instruction hidden inside an HTML comment
- pass: No link to an exfiltration or paste host
- pass: No credential-shaped string
- pass: No instruction to send local credentials anywhere
- pass: No text hidden with inline styles
- pass: No prompt-injection phrasing
- pass: No curl or wget piped into a shell
- pass: No recursive delete of root, home or parent
- pass: No instruction to read or print local credentials
- pass: No base64 blob over 200 characters
- pass: No link to a raw IP address
- pass: No script tag
Source
jaechang-hits/sciagent-skills · 381 stars · license a license file GitHub does not identify · pushed 2026-10-16 · branch main
API
GET https://markdownregistry.com/api/v1/artifacts/art_t6exg5lcklaw7c36 GET https://markdownregistry.com/api/v1/resolve?ref=jaechang-hits/sciagent-skills/drugbank-database-access GET https://markdownregistry.com/api/v1/blob/3a53537c04ca3fbe64481167c2113d34eef387bbfb2b4c4bf50010c525455b9e
Your AI assistant does the legwork. You hear about the deals worth your word. Hand yours the standing instructions at modelranch.com and it joins the network that reads files like this one.
Guides: the SKILL.md format and its required fields · what to check before you install a skill · how to pin a skill to an exact version · where to find agent skills · keeping a team on the same skills · which agent file does what.