assembling-fhir-bundles SKILL.md skillA
assembling-fhir-bundles from maziyarpanahi/openmed is an agent skill: a SKILL.md folder an AI agent loads when a task calls for it.
mdr add maziyarpanahi/openmed/assembling-fhir-bundles@v1.0Pins v1.0 in mdr.lock. Pin the fingerprint instead.
- Audit grade
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- Kind
- SKILL.md skill
- Repository
- maziyarpanahi/openmed
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skills/assembling-fhir-bundles/SKILL.md- Versions recorded
- 1
- Latest version
- v1.0, committed Jul 20, 2026
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- 8,802 bytes
- Repository stars
- 5,784
- License
- Apache-2.0
Package multiple FHIR R4 resources produced from OpenMed output into a single valid transaction Bundle ready to POST to an EHR, using OpenMed's verified bundle assembler openmed.clinical.exporters.fhir.to_bundle. Covers deterministic urn:uuid fullUrls, automatic in-Bundle reference rewriting, request blocks (method/url) for transaction vs batch, and conditional create. Use after exporting-to-fhir when the user has several Condition/Observation/MedicationStatement resources and wants one…
Collected from public GitHub. Every version is saved exactly as it was and never changes. Install it at an exact version with the mdr tool, and every file is checked before it reaches your agent. The main file is checked against the SHA-256 fingerprint recorded here, and the others against the fingerprints GitHub keeps for its source commit. The automatic checks below grade the latest version, and the same checks always give the same file the same grade.
What the file says
# Assembling FHIR Bundles
A FHIR server ingests one **transaction Bundle**, not loose resources, and the
resources inside it must cross-reference each other (`Condition.subject` →
Patient, `Observation.encounter` → Encounter, `DiagnosticReport.result` →
Observation). OpenMed ships a **deterministic, mechanical** Bundle assembler —
`openmed.clinical.exporters.fhir.to_bundle` — that wraps the resources you built
in `exporting-to-fhir` into a valid R4 Bundle and wires up the references.
## When to use
Use after you have a *list* of standalone resources from `exporting-to-fhir` and
the destination is a FHIR server. Reach for it when the user says "build a
Bundle", "transaction", "POST these resources", or needs internal references
resolved. To check the Bundle against US Core, hand off to `validating-us-core`.
## What OpenMed gives you (verified API)
```python
from openmed.clinical.exporters.fhir import to_bundle, deterministic_fullurl
bundle = to_bundle(
resources, # Sequence[Mapping] each with a resourceType
doc_id="note-2024-03-02-001", # seeds stable urn:uuid fullUrls
…Read the whole file at its exact version.
How to install
mdr add maziyarpanahi/openmed/assembling-fhir-bundles@sha256:651f5e1cf296cd51The line at the top of this page pins the label v1.0, which is what most people want. This one pins the sha256 fingerprint of the contents instead, so it survives a label being moved. Either way the exact version is written to mdr.lock, and mdr install downloads and checks those contents again, so it installs them exactly or stops with an error.
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The registry has recorded 1 version of this file, committed on Jul 20, 2026.
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Source
maziyarpanahi/openmed · 5,784 stars · license Apache-2.0 · pushed 2026-11-07 · branch master
API
GET https://markdownregistry.com/api/v1/artifacts/art_a6qtmbjmclzl7slh GET https://markdownregistry.com/api/v1/resolve?ref=maziyarpanahi/openmed/assembling-fhir-bundles GET https://markdownregistry.com/api/v1/blob/651f5e1cf296cd513f4e8f4366117d222bb102557dc3ed8ea0aa00c6c76b3dab
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