latchbio-integration SKILL.md skillA

latchbio-integration from k-dense-ai/scientific-agent-skills is an agent skill: a SKILL.md folder an AI agent loads when a task calls for it.

Install it, pinned
mdr add k-dense-ai/scientific-agent-skills/latchbio-integration@v2.3

Pins v2.3 in mdr.lock. Pin the fingerprint instead.

Audit grade
A, 17 of 17 checks passed
Kind
SKILL.md skill
Repository
k-dense-ai/scientific-agent-skills
Path
skills/latchbio-integration/SKILL.md
Versions recorded
6
Latest version
v2.3, committed Oct 1, 2026
First version recorded
May 27, 2026
Size
10,008 bytes
Repository stars
56,497
License
MIT

Builds, registers, debugs, and operates bioinformatics workflows on Latch using the Python SDK, CLI, Latch Data and Registry, Nextflow, Snakemake, programmatic execution, and Latch MCP. Use when authoring or deploying Latch workflows, configuring resources or interfaces, moving data, integrating Registry, or launching and monitoring runs.

Collected from public GitHub. Every version is saved exactly as it was and never changes. Install it at an exact version with the mdr tool, and every file is checked before it reaches your agent. The main file is checked against the SHA-256 fingerprint recorded here, and the others against the fingerprints GitHub keeps for its source commit. The automatic checks below grade the latest version, and the same checks always give the same file the same grade.

What the file says

# LatchBio Integration

## Current Baseline

This skill targets **Latch SDK 2.77.1**, released September 17, 2026. The package
metadata supports Python 3.9–3.12 and declares Python 3.9+.

Review status: the SDK imports, documented signatures, CLI help, and selected
workflow graph examples were checked locally with Python 3.12. Network-backed
examples are illustrative: no authenticated registration, data mutation, launch,
or MCP tool call was performed during this refresh.

Treat the installed package and its changelog as authoritative when a guide
disagrees with the SDK. Some Latch guides retain older Python ranges or
compatibility-specific pre-release pins, especially the Snakemake v2 tutorial.
Never combine commands or imports from different tracks without checking their
version requirements.

## When to Use

Use this skill to:

- Create or maintain Python SDK workflows and task graphs
- Package and register Python, Nextflow, or Snakemake pipelines
- Configure task CPU, memory, storage, GPU, caching, retries, and timeouts
- Work with Latch Data through `LPath`, `LatchFile`, `LatchDir`, or the CLI
- Read or update Latch Registry projects, tables, and records
…

Read the whole file at its exact version.

How to install

The exact contents, by fingerprint
mdr add k-dense-ai/scientific-agent-skills/latchbio-integration@sha256:0f01df45ed4aecb8

The line at the top of this page pins the label v2.3, which is what most people want. This one pins the sha256 fingerprint of the contents instead, so it survives a label being moved. Either way the exact version is written to mdr.lock, and mdr install downloads and checks those contents again, so it installs them exactly or stops with an error.

Badge

mdr badge

[![mdr](https://markdownregistry.com/badge/art_5odc34zekaronqrn.svg)](https://markdownregistry.com/a/art_5odc34zekaronqrn)

6 badge image fetches in 30 days. What the badge shows.

Versions

The registry has recorded 6 versions of this file, between May 27, 2026 and Oct 1, 2026, about one every 25 days.

versioncommittedcommitsizeaudit
v2.3 latest2026-10-01 a92663a 10,008 BA view · diff
v2.22026-09-30 ce9e6e9 9,485 BA view · diff
v2.12026-09-02 1e5eeff 9,485 BA view · diff
v2.02026-07-23 53c5897 8,527 BA view · diff
git:20260611.1b8fae32026-06-11 1b8fae3 9,825 BA view · diff
v1.02026-05-27 0936740 9,820 BA view

Audit of the latest version

A  17 of 17 checks passed. Fixed automatic checks with no AI involved, so the same checks give the same answer every run.
  • pass: Frontmatter block present
  • pass: Frontmatter declares a name
  • pass: Frontmatter declares a description
  • pass: Size between 200 bytes and 200 KB (10008 bytes)
  • pass: No zero-width or bidi control characters
  • pass: No instruction hidden inside an HTML comment
  • pass: No link to an exfiltration or paste host
  • pass: No credential-shaped string
  • pass: No instruction to send local credentials anywhere
  • pass: No text hidden with inline styles
  • pass: No prompt-injection phrasing
  • pass: No curl or wget piped into a shell
  • pass: No recursive delete of root, home or parent
  • pass: No instruction to read or print local credentials
  • pass: No base64 blob over 200 characters
  • pass: No link to a raw IP address
  • pass: No script tag

Source

GitHub

k-dense-ai/scientific-agent-skills · 56,497 stars · license MIT · pushed 2026-11-02 · branch main

API

GET https://markdownregistry.com/api/v1/artifacts/art_5odc34zekaronqrn
GET https://markdownregistry.com/api/v1/resolve?ref=k-dense-ai/scientific-agent-skills/latchbio-integration
GET https://markdownregistry.com/api/v1/blob/0f01df45ed4aecb81d672a5576820aee37c32864b4fe84bb4d049471a14d3e5c

Your AI assistant does the legwork. You hear about the deals worth your word. Hand yours the standing instructions at modelranch.com and it joins the network that reads files like this one.

Guides: the SKILL.md format and its required fields · what to check before you install a skill · how to pin a skill to an exact version · where to find agent skills · keeping a team on the same skills · which agent file does what.

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Every file in k-dense-ai/scientific-agent-skills

Other files named latchbio-integration

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