k-dense-ai/scientific-agent-skills · skills/arboreto/SKILL.md
arboreto skillA
Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3). Use when analyzing transcriptomics data (bulk RNA-seq, single-cell RNA-seq) to identify transcription factor-target gene relationships and regulatory interactions. Supports distributed computation for large-scale datasets.
Latest version
mdr add k-dense-ai/scientific-agent-skills/arboreto@v1.1Exact content
mdr add k-dense-ai/scientific-agent-skills/arboreto@sha256:230eac5da0a0dcdeBadge
[](https://markdownregistry.com/a/art_3keog2264guntimk)
0 badge views in 30 days
Versions
| version | committed | commit | size | audit | |
|---|---|---|---|---|---|
| v1.1 latest | 2026-09-02 | 1e5eeff | 9,416 B | A | view · diff |
| v1.0 | 2026-07-26 | b085e11 | 8,459 B | A | view · diff |
| git:20260611.1b8fae3 | 2026-06-11 | 1b8fae3 | 8,464 B | A | view |
Audit of the latest version
A 17 of 17 checks passed. Deterministic, no model, same answer every run.
- pass: Frontmatter block present
- pass: Frontmatter declares a name
- pass: Frontmatter declares a description
- pass: Size between 200 bytes and 200 KB (9416 bytes)
- pass: No zero-width or bidi control characters
- pass: No instruction hidden inside an HTML comment
- pass: No link to an exfiltration or paste host
- pass: No credential-shaped string
- pass: No instruction to send local credentials anywhere
- pass: No text hidden with inline styles
- pass: No prompt-injection phrasing
- pass: No curl or wget piped into a shell
- pass: No recursive delete of root, home or parent
- pass: No instruction to read or print local credentials
- pass: No base64 blob over 200 characters
- pass: No link to a raw IP address
- pass: No script tag
Source
GitHub
k-dense-ai/scientific-agent-skills · 42,925 stars · license MIT · pushed 2026-09-02 · branch main
API
GET https://markdownregistry.com/api/v1/artifacts/art_3keog2264guntimk GET https://markdownregistry.com/api/v1/resolve?ref=k-dense-ai/scientific-agent-skills/arboreto GET https://markdownregistry.com/api/v1/blob/230eac5da0a0dcdeafaf3f4141ccc21aee5385edf8718f87ec47e6c44a75bb1f