gtars SKILL.md skillA

gtars from k-dense-ai/scientific-agent-skills is an agent skill: a SKILL.md folder an AI agent loads when a task calls for it.

Install it, pinned
mdr add k-dense-ai/scientific-agent-skills/gtars@v1.5

Pins v1.5 in mdr.lock. Pin the fingerprint instead.

Audit grade
A, 17 of 17 checks passed
Kind
SKILL.md skill
Repository
k-dense-ai/scientific-agent-skills
Path
skills/gtars/SKILL.md
Versions recorded
7
Latest version
v1.5, committed Oct 1, 2026
First version recorded
Jun 11, 2026
Size
15,071 bytes
Repository stars
53,159
License
MIT

Supports Gtars for local genomic interval models and set algebra, overlaps and counts, consensus and coverage, tokenization, fragment processing, and refget/BEDbase planning across Python, Rust, and the CLI.

Collected from public GitHub. Every version is saved exactly as it was and never changes. Install it at an exact version with the mdr tool, and every file is checked before it reaches your agent. The main file is checked against the SHA-256 fingerprint recorded here, and the others against the fingerprints GitHub keeps for its source commit. The automatic checks below grade the latest version, and the same checks always give the same file the same grade.

What the file says

# Gtars

Gtars provides native Rust implementations, Python bindings, and a feature-gated
`gtars` binary for genomic interval and reference-sequence work. Start with the
bundled local inspectors; call upstream code only after the data contract,
provenance, resource bounds, and side effects are explicit.

## Verified snapshot (2026-10-01)

- Published Python wheel: [`gtars==0.10.0`](https://pypi.org/project/gtars/0.10.0/),
  released 2026-09-05, `Requires-Python >=3.10`; local examples were exercised
  on Python 3.12 with synthetic intervals, fragments, and FASTA.
- Rust meta-crate and CLI: [`gtars=0.10.0`](https://crates.io/crates/gtars/0.10.0)
  and [`gtars-cli=0.10.0`](https://crates.io/crates/gtars-cli/0.10.0), released
  2026-09-05. The binary is `gtars`; the wrapper's default feature set is empty.
  Rust/CLI examples are source-reviewed templates, not compiled executions.
- Direct [`gtars-refget=0.11.0`](https://crates.io/crates/gtars-refget/0.11.0)
  was released 2026-09-22. Its Rust `list_sequences()` now returns a `Result`.
  The wrapper requests refget 0.10.x; keep Cargo.lock because component
  dependencies use compatible ranges, not exact pins.
…

Read the whole file at its exact version.

How to install

The exact contents, by fingerprint
mdr add k-dense-ai/scientific-agent-skills/gtars@sha256:c3586bcfa1e8d89a

The line at the top of this page pins the label v1.5, which is what most people want. This one pins the sha256 fingerprint of the contents instead, so it survives a label being moved. Either way the exact version is written to mdr.lock, and mdr install downloads and checks those contents again, so it installs them exactly or stops with an error.

Badge

mdr badge

[![mdr](https://markdownregistry.com/badge/art_pdbkqx2c4a3gtww2.svg)](https://markdownregistry.com/a/art_pdbkqx2c4a3gtww2)

4 badge image fetches in 30 days. What the badge shows.

Versions

The registry has recorded 7 versions of this file, between Jun 11, 2026 and Oct 1, 2026, about one every 19 days.

versioncommittedcommitsizeaudit
v1.5 latest2026-10-01 a92663a 15,071 BA view · diff
v1.42026-09-30 ce9e6e9 13,667 BA view · diff
v1.32026-09-02 1e5eeff 13,219 BA view · diff
v1.22026-07-26 2f2022d 12,261 BA view · diff
v1.12026-07-26 b085e11 12,268 BA view · diff
v1.12026-07-24 025a3a6 12,272 BA view · diff
git:20260611.1b8fae32026-06-11 1b8fae3 7,823 BA view

Audit of the latest version

A  17 of 17 checks passed. Fixed automatic checks with no AI involved, so the same checks give the same answer every run.
  • pass: Frontmatter block present
  • pass: Frontmatter declares a name
  • pass: Frontmatter declares a description
  • pass: Size between 200 bytes and 200 KB (15071 bytes)
  • pass: No zero-width or bidi control characters
  • pass: No instruction hidden inside an HTML comment
  • pass: No link to an exfiltration or paste host
  • pass: No credential-shaped string
  • pass: No instruction to send local credentials anywhere
  • pass: No text hidden with inline styles
  • pass: No prompt-injection phrasing
  • pass: No curl or wget piped into a shell
  • pass: No recursive delete of root, home or parent
  • pass: No instruction to read or print local credentials
  • pass: No base64 blob over 200 characters
  • pass: No link to a raw IP address
  • pass: No script tag

Source

GitHub

k-dense-ai/scientific-agent-skills · 53,159 stars · license MIT · pushed 2026-10-19 · branch main

API

GET https://markdownregistry.com/api/v1/artifacts/art_pdbkqx2c4a3gtww2
GET https://markdownregistry.com/api/v1/resolve?ref=k-dense-ai/scientific-agent-skills/gtars
GET https://markdownregistry.com/api/v1/blob/c3586bcfa1e8d89a2abb23d74496d41e68daec5e7a8af6cefb9080a0ed469161

Your AI assistant does the legwork. You hear about the deals worth your word. Hand yours the standing instructions at modelranch.com and it joins the network that reads files like this one.

Guides: the SKILL.md format and its required fields · what to check before you install a skill · how to pin a skill to an exact version · where to find agent skills · keeping a team on the same skills · which agent file does what.

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Every file in k-dense-ai/scientific-agent-skills

Other files named gtars

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git:20260710.0115f49 · audit A · 4 stars

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