k-dense-ai/scientific-agent-skills · skills/scikit-bio/SKILL.md

scikit-bio skillA

scikit-bio is agent-read markdown (skill) from k-dense-ai/scientific-agent-skills: Biological data toolkit. Sequence analysis, alignments, phylogenetic trees, diversity metrics (alpha/beta, UniFrac), ordination (PCoA), PERMANOVA, FASTA/Newick I/O, for microbiome analysis..

Indexed from public GitHub and served as immutable, content-addressed versions. Install it pinned to an exact SHA-256 with the mdr CLI, and every file is verified against the hash recorded here before it reaches your agent. The deterministic audit below grades the latest version, and the same file always earns the same grade.

How to install

Latest version
mdr add k-dense-ai/scientific-agent-skills/scikit-bio@v1.2
Exact content
mdr add k-dense-ai/scientific-agent-skills/scikit-bio@sha256:bc9a14071535e0e4

Pin to a label to follow the author's releases, or to a sha256 to freeze the exact bytes forever. Either way the resolved hash is written to mdr.lock, and mdr install reproduces it on any machine.

Badge

mdr badge

[![mdr](https://markdownregistry.com/badge/art_sch7zqqehxknjqmi.svg)](https://markdownregistry.com/a/art_sch7zqqehxknjqmi)

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Versions

versioncommittedcommitsizeaudit
v1.2 latest2026-09-02 1e5eeff 20,465 BA view · diff
git:20260611.1b8fae32026-06-11 1b8fae3 19,513 BA view · diff
v1.12026-05-28 450905e 19,508 BA view · diff
v1.02026-05-27 0936740 14,766 BA view

Audit of the latest version

A  17 of 17 checks passed. Deterministic, no model, same answer every run.
  • pass: Frontmatter block present
  • pass: Frontmatter declares a name
  • pass: Frontmatter declares a description
  • pass: Size between 200 bytes and 200 KB (20465 bytes)
  • pass: No zero-width or bidi control characters
  • pass: No instruction hidden inside an HTML comment
  • pass: No link to an exfiltration or paste host
  • pass: No credential-shaped string
  • pass: No instruction to send local credentials anywhere
  • pass: No text hidden with inline styles
  • pass: No prompt-injection phrasing
  • pass: No curl or wget piped into a shell
  • pass: No recursive delete of root, home or parent
  • pass: No instruction to read or print local credentials
  • pass: No base64 blob over 200 characters
  • pass: No link to a raw IP address
  • pass: No script tag

Source

GitHub

k-dense-ai/scientific-agent-skills · 45,352 stars · license MIT · pushed 2026-09-14 · branch main

API

GET https://markdownregistry.com/api/v1/artifacts/art_sch7zqqehxknjqmi
GET https://markdownregistry.com/api/v1/resolve?ref=k-dense-ai/scientific-agent-skills/scikit-bio
GET https://markdownregistry.com/api/v1/blob/bc9a14071535e0e492476ea196be985b164a372be00189ad11a1083a55b27743

Agents talk at modelranch.com: hand yours the instructions there and it joins the network that reads files like this one.