abide-skill skillA
abide-skill is agent-read markdown (skill) from cuhk-aim-group/neurodiscovery: Use this skill whenever the user wants an end-to-end workflow for the ABIDE (Autism Brain Imaging Data Exchange) dataset, including download, BIDS organization, and processing of sMRI and rs-fMRI data. Triggers include: 'ABIDE', 'ABIDE data', 'process ABIDE', 'ABIDE fMRI', 'ABIDE sMRI', 'autism imaging', or any request to run the ABIDE pipeline. This is the NeuroClaw dataset-orchestration layer for ABIDE..
Indexed from public GitHub and served as immutable, content-addressed versions. Install it pinned to an exact SHA-256 with the mdr CLI, and every file is verified against the hash recorded here before it reaches your agent. The deterministic audit below grades the latest version, and the same file always earns the same grade.
What the file says
# ABIDE Skill (Dataset-Orchestration Layer) ## Overview `abide-skill` is the NeuroClaw orchestration skill for the **ABIDE (Autism Brain Imaging Data Exchange)** dataset. It coordinates a fixed three-phase workflow: 1. Download ABIDE data from the FCP/INDI repository or NITRC. 2. Prepare and validate BIDS-style data organization for downstream processing. 3. Delegate modality pipelines to `smri-skill` and `fmri-skill`. It also provides **phenotype extraction** and **QC integration** paths: - Extract and merge ABIDE phenotype tables (diagnosis, age, sex, site, FIQ, ADOS, etc.). - Generate per-subject QC summaries with exclusion lists. This skill follows NeuroClaw hierarchy: - Defines **WHAT to do**, not low-level implementation details. - Does **not** execute direct shell commands itself. - Delegates all execution via `claw-shell` to base/tool skills. **Research use only.** --- ## Download Stage (Mandatory First Step) ### Source ABIDE data is distributed through the **FCP/INDI** repository: - ABIDE I: https://fcon_1000.projects.nitrc.org/indi/abide/ - ABIDE II: https://fcon_1000.projects.nitrc.org/indi/abide_II.html - NITRC mirror: https://www.nitrc.org/projects/fcp_indi/ …
Read the whole file at its exact version.
How to install
mdr add cuhk-aim-group/neurodiscovery/abide-skill@git:20260505.e9ddd22mdr add cuhk-aim-group/neurodiscovery/abide-skill@sha256:397f52105335e0c4Pin to a label to follow the author's releases, or to a sha256 to freeze the exact bytes forever. Either way the resolved hash is written to mdr.lock, and mdr install reproduces it on any machine.
[](https://markdownregistry.com/a/art_fmqnp66luefq2i3j)
1 badge views in 30 days
Versions
Audit of the latest version
- pass: Frontmatter block present
- pass: Frontmatter declares a name
- pass: Frontmatter declares a description
- pass: Size between 200 bytes and 200 KB (12382 bytes)
- pass: No zero-width or bidi control characters
- pass: No instruction hidden inside an HTML comment
- pass: No link to an exfiltration or paste host
- pass: No credential-shaped string
- pass: No instruction to send local credentials anywhere
- pass: No text hidden with inline styles
- pass: No prompt-injection phrasing
- pass: No curl or wget piped into a shell
- pass: No recursive delete of root, home or parent
- pass: No instruction to read or print local credentials
- pass: No base64 blob over 200 characters
- pass: No link to a raw IP address
- pass: No script tag
Source
cuhk-aim-group/neurodiscovery · 91 stars · license MIT · pushed 2026-09-22 · branch main
API
GET https://markdownregistry.com/api/v1/artifacts/art_fmqnp66luefq2i3j GET https://markdownregistry.com/api/v1/resolve?ref=cuhk-aim-group/neurodiscovery/abide-skill GET https://markdownregistry.com/api/v1/blob/397f52105335e0c4f92097c86931b0a6d87b88e41c95980abdc627befd461d87
Your agent does the legwork. You hear about the deals worth your word. Hand yours the standing instructions at modelranch.com and it joins the network that reads files like this one.