oleafly/oleafly

36 instruction files for AI agents, collected from oleafly/oleafly. Install any of them at an exact version with mdr add oleafly/oleafly/<name>.

citation-management SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/citation-management/SKILL.md · Comprehensive citation management for academic research. Search OpenAlex, PubMed, and Google Scholar for papers…
v2.1.1 · audit A · 258 stars
experimental-design SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/experimental-design/SKILL.md · Design experiments and studies BEFORE data is collected — choosing a design, randomizing, blocking, and laying out…
v1.2 · audit A · 258 stars
exploratory-data-analysis SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/exploratory-data-analysis/SKILL.md · Perform bounded, local exploratory analysis of explicitly supported scientific files. Use for redacted CSV/TSV/JSON…
v1.2 · audit A · 258 stars
hypothesis-generation SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/hypothesis-generation/SKILL.md · Formulate evidence-bounded scientific questions, candidate hypotheses, rival explanations, causal or associational…
v2.2 · audit A · 258 stars
Import refine SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/import-refine/SKILL.md · Turn a document Oleafly imported from Word, Markdown, or PDF into a project that compiles cleanly and reads like it was…
v1.1.0 · audit A · 258 stars
literature-review SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/literature-review/SKILL.md · Conduct comprehensive, systematic literature reviews using multiple academic databases (PubMed, arXiv, bioRxiv…
v1.8 · audit C · 258 stars
Data analysis SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/oleafly-data-analysis/SKILL.md · Take data files that live in the project through to numbers, figures, and tables in the manuscript. Picks the method…
v1.0.0 · audit A · 258 stars
Figure prep SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/oleafly-figure-prep/SKILL.md · Build and place publication-quality figures in an Oleafly manuscript. Use when the user wants a TikZ or pgfplots…
v1.1.0 · audit B · 258 stars
Build and fix SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/oleafly-latex-build/SKILL.md · Drive Oleafly's compile, diagnose, fix loop until the document builds clean. Use when a compile fails, when the log…
v1.1.0 · audit A · 258 stars
oleafly-literature-sweep SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/oleafly-literature-sweep/SKILL.md · Turn a research question into an annotated reading list with provenance. Use when the user asks to find papers, survey…
v1.0.0 · audit A · 258 stars
Manuscript scaffold SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/oleafly-manuscript-scaffold/SKILL.md · Build a venue-shaped manuscript skeleton inside the open Oleafly project. Use when the user wants to start a paper, set…
v1.0.0 · audit A · 258 stars
oleafly-pre-submission SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/oleafly-pre-submission/SKILL.md · Run a pre-flight pass over the project before uploading to arXiv or a venue, and write a pass or fail checklist. Use…
v1.1.0 · audit A · 258 stars
oleafly-related-work SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/oleafly-related-work/SKILL.md · Draft or revise a related-work, background, or prior-art section in which every citation key already exists in the…
v1.0.0 · audit A · 258 stars
oleafly-research-loop SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/oleafly-research-loop/SKILL.md · Entry point for research writing in Oleafly. Load this first when the user says they are writing a paper, starting a…
v1.0.0 · audit A · 258 stars
oleafly-response-letter SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/oleafly-response-letter/SKILL.md · Turn reviewer comments and the changes already made into a point-by-point response letter, in LaTeX or Typst and in…
v1.1.0 · audit A · 258 stars
oleafly-review-manuscript SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/oleafly-review-manuscript/SKILL.md · Run a referee-grade review of the manuscript in the open project without changing a single manuscript file. Use when…
v1.0.0 · audit A · 258 stars
oleafly-slides-and-posters SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/oleafly-slides-and-posters/SKILL.md · Turn the manuscript in the open project into a talk deck or a conference poster and compile it in place. Use when asked…
v1.0.0 · audit A · 258 stars
oleafly-verify-claims SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/oleafly-verify-claims/SKILL.md · Audit a section claim by claim and report which statements the cited sources actually support. Use when the user asks…
v1.0.0 · audit A · 258 stars
OpenResearch (orx) SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/openresearch/SKILL.md · Search literature and drive OpenResearch experiments through the local orx CLI, then record every run in the project so…
v1.0.0 · audit C · 258 stars
paper-lookup SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/paper-lookup/SKILL.md · Search 11 academic literature APIs for papers, preprints, citations, and open-access full text, and return results with…
v2.1 · audit A · 258 stars
PDF to LaTeX SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/pdf-to-latex/SKILL.md · Finish rebuilding a PDF as an editable LaTeX project after the app's importer has made its first pass. Reconstructs…
v1.0.0 · audit A · 258 stars
peer-review SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/peer-review/SKILL.md · Prepare evidence-bounded, constructive peer-review drafts and structured manuscript assessments. Use for authorized…
v2.2 · audit B · 258 stars
pptx-posters SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/pptx-posters/SKILL.md · Create and audit editable scientific posters in macro-free PowerPoint (.pptx) from author-approved local content and…
v2.2 · audit A · 258 stars
research-grants SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/research-grants/SKILL.md · Write competitive research proposals for NSF, NIH, DOE, DARPA, and Taiwan NSTC. Agency-specific formatting, review…
v1.3 · audit B · 258 stars
research-lookup SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/research-lookup/SKILL.md · Compile current scholarly evidence for a scientific manuscript or research brief. Use when the user explicitly asks to…
v1.5 · audit A · 258 stars
scholar-evaluation SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/scholar-evaluation/SKILL.md · Provide qualitative-first, evidence-traceable developmental review of scholarly works and audit low-stakes…
v2.2 · audit A · 258 stars
scientific-brainstorming SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/scientific-brainstorming/SKILL.md · Facilitates evidence-aware scientific ideation with independent generation, structured discussion, explicit…
v1.2 · audit A · 258 stars
scientific-critical-thinking SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/scientific-critical-thinking/SKILL.md · Evaluate scientific claims and evidence quality. Use for assessing experimental design validity, identifying biases and…
v1.3 · audit B · 258 stars
scientific-schematics SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/scientific-schematics/SKILL.md · Create publication-quality scientific diagrams using Nano Banana 2 AI with smart iterative refinement. Uses Gemini 3.6…
v1.7 · audit B · 258 stars
scientific-slides SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/scientific-slides/SKILL.md · Build slide decks and presentations for research talks. Use this for making PowerPoint slides, conference…
v1.8 · audit B · 258 stars
scientific-visualization SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/scientific-visualization/SKILL.md · Create and audit truthful, accessible, publication-ready scientific figures with Matplotlib, Seaborn, or Plotly. Use…
v1.2 · audit A · 258 stars
scientific-writing SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/scientific-writing/SKILL.md · Draft, revise, and audit scientific manuscripts or reports with explicit evidence provenance, reporting-guideline…
v2.1 · audit A · 258 stars
statistical-analysis SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/statistical-analysis/SKILL.md · Guided statistical analysis for research data - test selection, assumption checking, effect sizes, power analysis…
v1.2 · audit A · 258 stars
statistical-power SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/statistical-power/SKILL.md · Sample-size and statistical power calculations for planning studies. Use whenever someone asks "how many…
v1.1 · audit A · 258 stars
Reusable template SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/template-generate/SKILL.md · Turn the current document into a reusable Oleafly template that follows the template pack authoring rules. Use when the…
v1.0.0 · audit A · 258 stars
venue-templates SKILL.md skill
oleafly/oleafly · src-tauri/resources/skills/venue-templates/SKILL.md · Prepare journal manuscripts, conference papers, research posters, and grant documents using venue-specific formatting…
v1.3.1 · audit A · 258 stars

Source

github.com/oleafly/oleafly · 258 stars · license AGPL-3.0 · pushed 2026-10-19