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filtering skillA

filtering is agent-read markdown (skill) from cuhk-aim-group/neurodiscovery: Use this model doc whenever the user wants to perform neuroimaging signal denoising with classical temporal filtering methods. This is a non-deep-learning preprocessing route focused on temporal cleaning, frequency selection, and preparation of cleaner time series for downstream analysis..

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# Filtering Model Doc

## Overview
Filtering is a classical non-deep-learning method for neuroimaging signal denoising.

- Model family: non-deep-learning preprocessing and denoising method
- Typical objectives:
  - remove unwanted frequency content from BOLD time series
  - retain frequency bands relevant to resting-state or task analysis
  - prepare cleaner voxel-wise or ROI-wise time series for downstream connectivity, decoding, or statistical analysis
- Primary input: preprocessed fMRI time series, optional confounds, optional mask, TR
- Primary output: denoised BOLD image, cleaned ROI time series, optional QC summaries

In NeuroClaw, this document is model-level guidance for temporal filtering workflows rather than predictive modeling.

Upstream preparation should usually be delegated to:
- `fmri-skill` for modality-level denoising planning and validated preprocessing sequences
- `nilearn-tool` for concrete filtering and cleaned image export

**Research use only.**

---

## Quick Start

### 1) Prepare denoising inputs
Expected inputs:
- preprocessed BOLD image
- repetition time (`TR`)
- optional confounds TSV
- optional brain mask
- optional requested frequency band
…

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Source

GitHub

cuhk-aim-group/neurodiscovery · 91 stars · license MIT · pushed 2026-09-22 · branch main

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