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cpm SKILL.md skillA

cpm from cuhk-aim-group/neurodiscovery is an agent skill: a SKILL.md folder an AI agent loads when a task calls for it.

Install it, pinned

mdr add cuhk-aim-group/neurodiscovery/cpm@git:20260825.cbd02ff

Pins git:20260825.cbd02ff in mdr.lock. Pin the fingerprint instead.

Audit grade: A, 17 of 17 checks passed
Kind: SKILL.md skill
Repository: cuhk-aim-group/neurodiscovery
Path: skills/cpm/SKILL.md
Versions recorded: 1
Latest version: git:20260825.cbd02ff, committed Aug 25, 2026
Size: 2,675 bytes
Repository stars: 93
License: MIT

Use this model skill whenever the user wants Connectome Predictive Modeling with fold-local functional-connectivity edge selection for classification or regression. Triggers include 'CPM', 'connectome predictive modeling', 'functional connectivity prediction', 'positive network', 'negative network', and 'edge selection'.

Collected from public GitHub. Every version is saved exactly as it was and never changes. Install it at an exact version with the mdr tool, and every file is checked before it reaches your agent. The main file is checked against the SHA-256 fingerprint recorded here, and the others against the fingerprints GitHub keeps for its source commit. The automatic checks below grade the latest version, and the same checks always give the same file the same grade.

What the file says

# CPM Skill

## Overview

`cpm` is the canonical NeuroClaw implementation of Connectome Predictive
Modeling. Edge selection is repeated independently inside every training fold.

| Task | Input | Output |
|---|---|---|
| Classification | subject FC matrices/vectors | class and probability |
| Regression | subject FC matrices/vectors | continuous prediction |

---

## Installation

```bash
pip install numpy pandas scipy scikit-learn joblib
```

---

## Workflows

### 1. Prepare data

`connectomes.npz`:

```text
X:          [subjects, nodes, nodes] or [subjects, edges]
subject_id: [subjects]
```

`labels.csv` contains the same subject IDs and a target column.

### 2. Regression

```bash
python skills/cpm/scripts/train_reference.py \
  --connectomes connectomes.npz \
  --labels labels.csv \
  --target cognitive_score \
  --subject-col subject_id \
  --task regression \
  --p-threshold 0.01 \
  --folds 5 \
  --output-dir run_models_output/cpm
```

### 3. Classification

```bash
python skills/cpm/scripts/train_reference.py \
  --connectomes connectomes.npz \
  --labels labels.csv \
  --target diagnosis \
  --task classification \
  --p-threshold 0.01 \
…

Read the whole file at its exact version.

How to install

The exact contents, by fingerprint

mdr add cuhk-aim-group/neurodiscovery/cpm@sha256:67395d54be17a9ab

The line at the top of this page pins the label git:20260825.cbd02ff, which is what most people want. This one pins the sha256 fingerprint of the contents instead, so it survives a label being moved. Either way the exact version is written to mdr.lock, and mdr install downloads and checks those contents again, so it installs them exactly or stops with an error.

Badge

[![mdr](https://markdownregistry.com/badge/art_s4oaxusjygaqszjo.svg)](https://markdownregistry.com/a/art_s4oaxusjygaqszjo)

3 badge image fetches in 30 days. What the badge shows.

Versions

The registry has recorded 1 version of this file, committed on Aug 25, 2026.

version	committed	commit	size	audit
git:20260825.cbd02ff latest	2026-08-25	cbd02ff	2,675 B	A	view

Audit of the latest version

A 17 of 17 checks passed. Fixed automatic checks with no AI involved, so the same checks give the same answer every run.

pass: Frontmatter block present
pass: Frontmatter declares a name
pass: Frontmatter declares a description
pass: Size between 200 bytes and 200 KB (2675 bytes)
pass: No zero-width or bidi control characters
pass: No instruction hidden inside an HTML comment
pass: No link to an exfiltration or paste host
pass: No credential-shaped string
pass: No instruction to send local credentials anywhere
pass: No text hidden with inline styles
pass: No prompt-injection phrasing
pass: No curl or wget piped into a shell
pass: No recursive delete of root, home or parent
pass: No instruction to read or print local credentials
pass: No base64 blob over 200 characters
pass: No link to a raw IP address
pass: No script tag

Source

GitHub

cuhk-aim-group/neurodiscovery · 93 stars · license MIT · pushed 2026-10-23 · branch main

API

GET https://markdownregistry.com/api/v1/artifacts/art_s4oaxusjygaqszjo
GET https://markdownregistry.com/api/v1/resolve?ref=cuhk-aim-group/neurodiscovery/cpm
GET https://markdownregistry.com/api/v1/blob/67395d54be17a9ab5952a9b0672228ba0c96bf33666b199dae36cc9cb3174924

Your AI assistant does the legwork. You hear about the deals worth your word. Hand yours the standing instructions at modelranch.com and it joins the network that reads files like this one.

Guides: the SKILL.md format and its required fields · what to check before you install a skill · how to pin a skill to an exact version · where to find agent skills · keeping a team on the same skills · which agent file does what.