scdenney/open-science-skills

scdenney/open-science-skills · codex/advisor/SKILL.md · Consult an independent, read-only GPT-6 Astra advisor before committing to a substantive interpretation, approach, or…

scdenney/open-science-skills · codex/citation-check/SKILL.md · Audits the citation layer of a manuscript — in-text and reference-list parity, fabricated or nonexistent sources, DOIs…

scdenney/open-science-skills · codex/conjoint-cleaning/SKILL.md · Turns a raw Qualtrics conjoint export into an analysis-ready long-format dataset — export settings and metadata rows…

scdenney/open-science-skills · codex/conjoint-design/SKILL.md · Designs conjoint and factorial-vignette experiments end to end — attribute architecture and randomization restrictions…

scdenney/open-science-skills · codex/conjoint-diagnostics/SKILL.md · Reviews an existing conjoint study for threats to inference and returns prioritized findings across five areas — design…

scdenney/open-science-skills · codex/cross-national-design/SKILL.md · Designs multi-country survey experiments — case selection with a stated comparative logic, instrument localization and…

scdenney/open-science-skills · codex/deliverable-intake/SKILL.md · Turns raw captures, dictated braindumps in a deliverable’s inbox/, or recent macwhspr dictation-log entries into…

scdenney/open-science-skills · codex/deliverable-lint/SKILL.md · Reviews a whole deliverable, such as a talk, course module, paper, chapter, or referee report, against its manifest…

scdenney/open-science-skills · codex/deliverable-open/SKILL.md · Opens a deliverable, such as a talk, course module, paper, book chapter, or referee report, for AI-assisted work across…

scdenney/open-science-skills · codex/diverge/SKILL.md · Generate 3-5 conceptually distinct approaches labeled by creativity dimension (Novel, Surprising, Diverse…

scdenney/open-science-skills · codex/doc-to-markdown/SKILL.md · Read or convert any document a research workflow hands you — PDF, Word, PowerPoint, Excel, OpenDocument, RTF, EPUB, or…

scdenney/open-science-skills · codex/fact-check/SKILL.md · Fact-check manuscript claims against cited sources in a per-source Markdown knowledge base. Use to audit claim support…

scdenney/open-science-skills · codex/figure-table-audit/SKILL.md · End-stage QA on a finished figure and table set — an inventory with in-text callouts and producing scripts…

scdenney/open-science-skills · codex/figures/SKILL.md · Design and format publication-quality figures. Use for chart choice, color, scales, legends, captions, accessibility…

scdenney/open-science-skills · codex/finished/SKILL.md · End-of-session closure for a research or code repository. Records what actually changed into the project's own handoff…

scdenney/open-science-skills · codex/hypothesis-building/SKILL.md · Turns a theory into falsifiable, pre-registerable hypotheses — DAGs and backdoor closure, how the design resolves the…

scdenney/open-science-skills · codex/journal-review/SKILL.md · Drafts a referee report on someone else's manuscript for a journal editor — a recommendation, a summary of the claim…

scdenney/open-science-skills · codex/list-experiment/SKILL.md · Designs and diagnoses list experiments (the item count technique) — whether indirect measurement is warranted at all…

scdenney/open-science-skills · codex/literature-review/SKILL.md · Build or audit a literature review. Use for evidence maps, gap analysis, contribution checks, source verification, and…

scdenney/open-science-skills · codex/llm-calibration-logprobs/SKILL.md · Reads a model's own uncertainty off its token log-probabilities — collecting logprobs and aggregating multi-token…

scdenney/open-science-skills · codex/methods-reporting/SKILL.md · Audits a methods section against a 45-item checklist synthesized from the APSA Experimental Section rubric, JARS-Quant…

scdenney/open-science-skills · codex/model-committee/SKILL.md · Run one consequential, contestable decision through a deliberative committee of GPT-6 Astra and Claude Opus, chaired by…

scdenney/open-science-skills · codex/model-council-voting/SKILL.md · Runs several language models as independent coders on the same labeling or discovery task and reads their disagreement…

scdenney/open-science-skills · codex/narrative-building/SKILL.md · Draft or audit scientific introductions. Use for argument logic, framing, contribution structure, and coherence across…

scdenney/open-science-skills · codex/orchestrate/SKILL.md · Orchestrate complex work from an active gpt-6-astra or gpt-5.6-sol Codex session. The detected lead owns decomposition…

scdenney/open-science-skills · codex/paper-review-lite/SKILL.md · Run a pre-submission manuscript audit covering argument, numerics, references, writing, figures, methods…

scdenney/open-science-skills · codex/paper-tex/SKILL.md · Typeset a working paper or journal submission in house-style LaTeX from Markdown, Word, TeX, ODT, RTF, or HTML. Use to…

scdenney/open-science-skills · codex/pre-registration-writing/SKILL.md · Writes a pre-analysis plan before data collection — registry selection (OSF, AsPredicted, AEA, EGAP), PAP document…

scdenney/open-science-skills · codex/qualtrics-ops/SKILL.md · Operate or audit a live Qualtrics survey via the v3 APIs without breaking fielding — publish gating, quotas, flow…

scdenney/open-science-skills · codex/referee-response/SKILL.md · Organizes and formats an author's response to peer review — extracts every distinct point from the referee reports and…

scdenney/open-science-skills · codex/replication-package/SKILL.md · Scaffold or audit a social-science replication package, and audit the manuscript and its archived research objects…

scdenney/open-science-skills · codex/research-grill/SKILL.md · Interviews a researcher in rounds until a research idea, design, or draft has no unexamined decision. Numbers every…

scdenney/open-science-skills · codex/research-repo/SKILL.md · Scaffold or audit an entire research project repository organized around its source library. Use when starting…

scdenney/open-science-skills · codex/research-wayfinder/SKILL.md · Plan a research project as a durable decision map, resolving one design decision per session until the destination is a…

scdenney/open-science-skills · codex/sitrep/SKILL.md · Start-of-session situational report for a research or code repository. Reads whatever handoff, log, or status artifacts…

scdenney/open-science-skills · codex/spawn/SKILL.md · Spawn full peer Codex or Claude sessions in their own panes and git worktrees — real sessions, not subagents — briefed…

scdenney/open-science-skills · codex/survey-data-audit/SKILL.md · Audit fielded survey response data for registered elements, data quality, bot and AI-automation screening, and sample…

scdenney/open-science-skills · codex/survey-design/SKILL.md · Designs survey instruments — item-specific question wording that avoids acquiescence, double-barreling, and leading…

scdenney/open-science-skills · codex/tables/SKILL.md · Design and format publication-quality tables. Use for column order, row grouping, notes, statistical precision…

scdenney/open-science-skills · codex/text-classification/SKILL.md · Designs and validates LLM-based text classification for research data — codebook construction, choice of learning…

scdenney/open-science-skills · codex/topic-modeling/SKILL.md · Specifies and diagnoses structural topic models for survey and experimental text — choosing among STM, LDA, and…

scdenney/open-science-skills · codex/vlm-ocr/SKILL.md · OCR scanned or image-only corpora with vision-language models, in three phases. Use `evaluate` to compare candidate OCR…

scdenney/open-science-skills · plugin/skills/advisor/SKILL.md · Consult Fable as an independent reviewer at maximum reasoning effort. The calling session is the main model, Opus or…

scdenney/open-science-skills · plugin/skills/citation-check/SKILL.md · Audits a manuscript’s citation layer, including in-text and reference-list parity, fabricated or nonexistent sources…

scdenney/open-science-skills · plugin/skills/conjoint-cleaning/SKILL.md · Turns a raw Qualtrics conjoint export into an analysis-ready long-format dataset. Covers export settings and metadata…

scdenney/open-science-skills · plugin/skills/conjoint-design/SKILL.md · Designs conjoint and factorial-vignette experiments end to end. Covers attribute architecture and randomization…

scdenney/open-science-skills · plugin/skills/conjoint-diagnostics/SKILL.md · Reviews an existing conjoint study for inferential threats and returns prioritized findings across design integrity…

scdenney/open-science-skills · plugin/skills/cross-national-design/SKILL.md · Designs multi-country survey experiments. Covers case selection with comparative logic, instrument localization and…

scdenney/open-science-skills · plugin/skills/deliverable-intake/SKILL.md · Turns raw captures, dictated braindumps in a deliverable’s inbox/, or recent macwhspr dictation-log entries into…

scdenney/open-science-skills · plugin/skills/deliverable-lint/SKILL.md · Reviews a whole deliverable, such as a talk, course module, paper, chapter, or referee report, against its manifest…

scdenney/open-science-skills · plugin/skills/deliverable-open/SKILL.md · Opens a deliverable, such as a talk, course module, paper, book chapter, or referee report, for AI-assisted work across…

scdenney/open-science-skills · plugin/skills/diverge/SKILL.md · Generate 3-5 conceptually distinct approaches labeled by creativity dimension, Novel, Surprising, Diverse…

scdenney/open-science-skills · plugin/skills/doc-to-markdown/SKILL.md · Read or convert documents in a research workflow, including PDF, Word, PowerPoint, Excel, OpenDocument, RTF, EPUB, and…

scdenney/open-science-skills · plugin/skills/fact-check/SKILL.md · Fact-checks manuscript claims against their cited sources. Locates each source’s knowledge-base Markdown file and…

scdenney/open-science-skills · plugin/skills/figure-table-audit/SKILL.md · Provides end-stage QA for a finished figure and table set. Checks inventory and in-text callouts, producing scripts…

scdenney/open-science-skills · plugin/skills/figures/SKILL.md · Designs and formats publication-quality figures for social-science manuscripts. Covers chart type, scales, color…

scdenney/open-science-skills · plugin/skills/finished/SKILL.md · End-of-session closure for a research or code repository. Records what actually changed into the project's own handoff…

scdenney/open-science-skills · plugin/skills/hypothesis-building/SKILL.md · Turns theory into falsifiable, pre-registerable hypotheses. Covers DAGs and backdoor closure, design resolution of the…

scdenney/open-science-skills · plugin/skills/journal-review/SKILL.md · Drafts a referee report for a journal editor. Produces a recommendation, claim-and-design summary, three to six…

scdenney/open-science-skills · plugin/skills/list-experiment/SKILL.md · Designs and diagnoses list experiments, or the item count technique. Covers whether indirect measurement is warranted…

scdenney/open-science-skills · plugin/skills/literature-review/SKILL.md · Builds or audits a literature review. Produces an evidence map, closest prior work, source clusters, a gap verdict, and…

scdenney/open-science-skills · plugin/skills/llm-calibration-logprobs/SKILL.md · Reads model uncertainty from token log-probabilities. Covers collecting logprobs and aggregating multi-token labels…

scdenney/open-science-skills · plugin/skills/methods-reporting/SKILL.md · Audits a methods section against a 45-item checklist synthesized from the APSA Experimental Section rubric, JARS-Quant…

scdenney/open-science-skills · plugin/skills/model-committee/SKILL.md · Runs a deliberative two-model committee with GPT-6 Astra and Claude Opus under a selectable chair. Fable is the default…

scdenney/open-science-skills · plugin/skills/model-council-voting/SKILL.md · Runs several language models as independent coders on one labeling or discovery task and treats disagreement as data…

scdenney/open-science-skills · plugin/skills/narrative-building/SKILL.md · Drafts or audits a scientific paper’s introduction and framing. Covers the motivating real-world "why", evidence audit…

scdenney/open-science-skills · plugin/skills/orchestrate/SKILL.md · Runs a multi-model orchestration workflow led by the session’s strongest available model, Fable or Claude Opus…

scdenney/open-science-skills · plugin/skills/paper-review-lite/SKILL.md · Provides a pre-submission manuscript audit covering argument, numerical consistency, references and DOIs, writing…

scdenney/open-science-skills · plugin/skills/paper-tex/SKILL.md · Typesets a working paper or journal submission in house-style LaTeX from Markdown, Word (.docx), TeX, ODT, RTF, or…

scdenney/open-science-skills · plugin/skills/pre-registration-writing/SKILL.md · Writes a pre-analysis plan before data collection. Covers registry selection, OSF, AsPredicted, AEA, EGAP, PAP…

scdenney/open-science-skills · plugin/skills/presubmit/SKILL.md · Launches and configures the standalone presubmit CLI, an API-driven adversarial peer-review pipeline with 30-plus…

scdenney/open-science-skills · plugin/skills/qualtrics-ops/SKILL.md · Operates or audits a live Qualtrics survey through the v3 APIs without disrupting fielding. Covers publish gating…

scdenney/open-science-skills · plugin/skills/referee-response/SKILL.md · Organizes and formats an author’s response to peer review. Extracts every distinct point from referee reports and the…

scdenney/open-science-skills · plugin/skills/replication-package/SKILL.md · Scaffolds or audits a social-science replication package and evaluates the manuscript and archived research objects…

scdenney/open-science-skills · plugin/skills/research-grill/SKILL.md · Interviews a researcher in rounds until a research idea, design, or draft has no unexamined decision. Numbers every…

scdenney/open-science-skills · plugin/skills/research-repo/SKILL.md · Scaffolds or audits an entire research-project repository organized around its source library. Use when the user…

scdenney/open-science-skills · plugin/skills/research-wayfinder/SKILL.md · Plans a research project as a decision map that persists across sessions. The destination is a defensible…

scdenney/open-science-skills · plugin/skills/sitrep/SKILL.md · Start-of-session situational report for a research or code repository. Reads whatever handoff, log, or status artifacts…

scdenney/open-science-skills · plugin/skills/spawn/SKILL.md · Spawns full Claude Code peer sessions in separate terminal panes and git worktrees, real sessions rather than…

scdenney/open-science-skills · plugin/skills/survey-data-audit/SKILL.md · Audits fielded survey-response data for registered elements, data quality, bot and AI-automation screening, and sample…

scdenney/open-science-skills · plugin/skills/survey-design/SKILL.md · Designs survey instruments. Covers item-specific wording that avoids acquiescence, double-barreling, and leading…

scdenney/open-science-skills · plugin/skills/tables/SKILL.md · Designs and formats publication-quality tables for social-science manuscripts. Covers column order, row grouping and…

scdenney/open-science-skills · plugin/skills/text-classification/SKILL.md · Designs and validates LLM-based text classification for research data. Covers codebook construction, learning-regime…

scdenney/open-science-skills · plugin/skills/topic-modeling/SKILL.md · Specifies and diagnoses structural topic models for survey and experimental text. Covers STM, LDA, and BERTopic choice…

scdenney/open-science-skills · plugin/skills/vlm-ocr/SKILL.md · OCRs scanned or image-only corpora with vision-language models in three phases. Evaluate compares candidate systems…